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Published on: May 10, 2013
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Aerococcus agrisoli sp. nov., isolated from paddy soil
Lina Sun1,2, Wen Qiu1,3, Xinhua Gao1,4
1Eco-Environmental Protection Research Institute, Shanghai Academy of Agricultural Sciences, Shanghai, 201403, PR China.
International Journal of Systematic and Evolutionary Microbiology
|November 1, 2023
Summary
A novel bacterium, Aerococcus agrisoli, was discovered in Chinese paddy soil. This Gram-positive rod exhibits unique characteristics, distinguishing it as a new species within the Aerococcus genus.
Area of Science:
- Microbiology
- Bacteriology
- Environmental Microbiology
Background:
- The genus Aerococcus comprises Gram-positive, facultative anaerobic cocci, often found in diverse environments.
- Accurate taxonomic classification of newly isolated microorganisms is crucial for understanding microbial diversity and ecological roles.
Purpose of the Study:
- To characterize and taxonomically classify a novel bacterial strain, SJQ22T, isolated from a paddy soil sample.
- To determine if strain SJQ22T represents a new species within the genus Aerococcus.
Main Methods:
- Isolation and cultivation of strain SJQ22T from paddy soil.
- Morphological, physiological, and biochemical characterization.
- 16S rRNA gene sequence analysis for phylogenetic placement.
- Chemotaxonomic analysis (fatty acid profiling).
- DNA G + C content determination.
- DNA-DNA hybridization for relatedness studies.
Main Results:
- Strain SJQ22T is a non-spore-forming, Gram-positive, short rod with optimal growth at 30 °C and pH 7.0.
- 16S rRNA gene sequence similarity to Aerococcus viridans (98.6%) and Aerococcus urinaeequi (98.5%) suggests placement within the Aerococcus genus.
- Low DNA-DNA relatedness (13±2% with A. viridans, 9±2% with A. urinaeequi) and distinct phenotypic characteristics differentiate SJQ22T from known species.
- Predominant fatty acids were C16:0 and C18:1 ω9c, and DNA G+C content was 39.0 mol%.
Conclusions:
- Strain SJQ22T represents a distinct genotypic and phenotypic entity.
- The data strongly support the classification of strain SJQ22T as a novel species within the genus Aerococcus.
- The proposed name for the novel species is Aerococcus agrisoli sp. nov., with SJQ22T as the type strain.
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