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Updated: Jul 11, 2025

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Phytophthora capsici genome assembly for two isolates using long-read Oxford Nanopore Technology sequencing
Emmanuel Szadkowski1, Jacques Lagnel1, Nasradin Touhami1
1INRAE, GAFL, Montfavet, France.
Microbiology Resource Announcements
|November 10, 2023
Abstract:
The oomycete Phytophthora capsici is a common pathogen of the Solanaceae and Cucurbitaceae families. An improved assembly for the reference isolate LT1534 was constructed using Oxford Nanopore Technologies and Illumina data. Additionally, an unpolished assembly was produced for the European isolate Pc285 collected on chili pepper using Oxford Nanopore reads.
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