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Sequencing Small Non-coding RNA from Formalin-fixed Tissues and Serum-derived Exosomes from Castration-resistant Prostate Cancer Patients
Published on: November 19, 2019
Therapeutic Resistance Models and Treatment Sequencing in Advanced Prostate Cancer
Zachary A Schaaf1, Shu Ning1, Amy R Leslie1
1Department of Urologic Surgery, University of California Davis, Sacramento, CA 95817, USA.
Abstract:
Current common treatments for castration-resistant prostate cancer (CRPC) typically belong to one of three major categories: next-generation anti-androgen therapies (NGAT) including enzalutamide, abiraterone acetate, apalutamide, and darolutamide; taxane therapy represented by docetaxel; and PARP inhibitors (PARPi) like olaparib. Although these treatments have shown efficacy and have improved outcomes for many patients, some do not survive due to the emergence of therapeutic resistance. The clinical landscape is further complicated by limited knowledge about how the sequence of treatments impacts the development of therapeutic cross-resistance in CRPC. We have developed multiple CRPC models of acquired therapeutic resistance cell sublines from C4-2B cells. These include C4-2B MDVR, C4-2B AbiR, C4-2B ApaR, C4-2B DaroR, TaxR, and 2B-olapR, which are resistant to enzalutamide, abiraterone, apalutamide, darolutamide, docetaxel, and olaparib, respectively. These models are instrumental for analyzing gene expression and assessing responses to various treatments. Our findings reveal distinct cross-resistance characteristics among NGAT-resistant cell sublines. Specifically, resistance to enzalutamide induces resistance to abiraterone and vice versa, while maintaining sensitivity to taxanes and olaparib. Conversely, cells with acquired resistance to docetaxel exhibit cross-resistance to both cabazitaxel and olaparib but retain sensitivity to NGATs like enzalutamide and abiraterone. OlapR cells, significantly resistant to olaparib compared to parental cells, are still responsive to NGATs and docetaxel. Moreover, OlapR models display cross-resistance to other clinically relevant PARP inhibitors, including rucaparib, niraparib, and talazoparib. RNA-sequencing analyses have revealed a complex network of altered gene expressions that influence signaling pathways, energy metabolism, and apoptotic signaling, pivotal to cancer's evolution and progression. The data indicate that resistance mechanisms are distinct among different drug classes. Notably, NGAT-resistant sublines exhibited a significant downregulation of androgen-regulated genes, contrasting to the stable expression noted in olaparib and docetaxel-resistant sublines. These results may have clinical implications by showing that treatments of one class can be sequenced with those from another class, but caution should be taken when sequencing drugs of the same class.
Insights
Developing new castration-resistant prostate cancer (CRPC) models reveals distinct drug resistance patterns. Understanding these cross-resistance mechanisms is key for effective treatment sequencing in CRPC patients.
Area of Science:
- Oncology
- Molecular Biology
- Pharmacology
Background:
- Castration-resistant prostate cancer (CRPC) treatments like next-generation anti-androgen therapies (NGAT), taxanes, and PARP inhibitors (PARPi) face therapeutic resistance.
- Limited understanding exists regarding how treatment sequences impact cross-resistance development in CRPC.
- Developing models of acquired resistance is crucial for investigating these mechanisms.
Purpose of the Study:
- To develop and characterize CRPC cell sublines with acquired resistance to various therapeutic agents.
- To investigate the cross-resistance patterns among different classes of CRPC drugs.
- To analyze gene expression changes associated with acquired therapeutic resistance.
Main Methods:
- Generation of CRPC cell sublines (C4-2B MDVR, AbiR, ApaR, DaroR, TaxR, 2B-olapR) exhibiting resistance to specific drugs.
- Assessment of cross-resistance profiles by exposing resistant sublines to different treatment classes.
- RNA-sequencing analysis to identify differential gene expression patterns in resistant versus parental cells.
Main Results:
- NGAT-resistant sublines showed cross-resistance between enzalutamide and abiraterone but retained sensitivity to taxanes and olaparib.
- Docetaxel-resistant cells displayed cross-resistance to cabazitaxel and olaparib, while remaining sensitive to NGATs.
- Olaparib-resistant cells were cross-resistant to other PARPi and sensitive to NGATs and docetaxel, with distinct gene expression alterations.
Conclusions:
- Distinct resistance mechanisms exist for different drug classes in CRPC.
- NGAT resistance involves downregulation of androgen-regulated genes, unlike PARPi or taxane resistance.
- Findings support sequencing treatments from different drug classes but advise caution within the same class.
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