Identification of Fibrotic Biomarkers Associated with Macrophages in Diabetic Nephropathy

Rongrong Hou1, Lei Gao1, Junhong Long1

  • 1Department of Endocrinology, The Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi, China (mainland).

Insights

New biomarkers, MMP2, CASP3, and HIF-1alpha, are identified for predicting diabetic nephropathy (DN) fibrosis. These genes correlate with macrophage infiltration and may regulate oxidative stress in kidney injury.

Area of Science:

  • Nephrology
  • Immunology
  • Biochemistry

Background:

  • Diabetic nephropathy (DN) is a leading cause of end-stage renal disease.
  • Renal fibrosis is a key pathological feature of DN with limited therapeutic options.
  • Macrophage function and oxidative stress are implicated in DN pathogenesis.

Purpose of the Study:

  • Identify oxidative stress- and macrophage-related biomarkers for DN fibrosis.
  • Investigate the role of identified biomarkers in DN progression.

Main Methods:

  • Differential gene expression analysis on the GSE96804 dataset.
  • Immune cell infiltration analysis using xCell and WGCNA.
  • Pathway enrichment analysis (GO, KEGG) and protein-protein interaction network construction.
  • Validation in an external dataset (GSE30528) and in vitro cell models.

Main Results:

  • MMP2, CASP3, and HIF-1alpha identified as upregulated biomarkers in DN.
  • These biomarkers positively correlated with macrophage and M1 macrophage infiltration.
  • High expression of these genes observed in high glucose-treated MPC5 cells and advanced glycation end product-treated THP-1 macrophages.

Conclusions:

  • MMP2, CASP3, and HIF-1alpha serve as valuable biomarkers for predicting DN fibrotic progression.
  • These genes demonstrate diagnostic potential for DN.
  • They may contribute to DN fibrosis by modulating oxidative stress and macrophage dynamics.

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