Related Experiment Video
Updated: Jul 11, 2025

Drug Repurposing Hypothesis Generation Using the "RE:fine Drugs" System
Published on: December 11, 2016
Exploring disease-causing traits for drug repurposing in critically ill COVID-19 patients: A causal inference
Hannes A Baukmann1, Justin L Cope1, Colin Bannard2
1biotx.ai GmbH, Am Mühlenberg 11, 14476 Potsdam, Germany.
Abstract:
Despite recent development of vaccines to prevent SARS-CoV-2 infection, treatment of critically ill COVID-19 patients remains an important goal. In principle, genome-wide association studies (GWASs) provide a shortcut to the clinical evidence needed to repurpose existing drugs; however, genes identified frequently lack a causal disease link. We report an alternative method for finding drug repurposing targets, focusing on disease-causing traits beyond immediate disease genetics. Sixty blood cell types and biochemistries, and body mass index, were screened on a cohort of critically ill COVID-19 cases and controls that exhibited mild symptoms after infection, yielding high neutrophil cell count as a possible causal trait for critical illness. Our methodology identified CDK6 and janus kinase (JAK) inhibitors as treatment targets that were validated in an ex vivo neutrophil extracellular trap (NET) formation assay. Our methodology demonstrates the increased power for drug target identification by leveraging large disease-causing trait datasets.
Insights
This study identifies high neutrophil count as a trait linked to critical COVID-19 illness. It suggests CDK6 and janus kinase (JAK) inhibitors as potential drug repurposing targets for treating severe COVID-19.
Area of Science:
- Immunology
- Genetics
- Pharmacology
Background:
- Effective treatments for critically ill COVID-19 patients are still needed, even with vaccine development.
- Genome-wide association studies (GWASs) can identify drug repurposing targets but often lack direct causal links to disease.
- Identifying disease-causing traits beyond immediate genetics is crucial for effective drug discovery.
Purpose of the Study:
- To develop and validate an alternative method for identifying drug repurposing targets for critical COVID-19.
- To investigate disease-causing traits associated with severe COVID-19 illness.
- To identify specific molecular targets and therapeutic agents for COVID-19 treatment.
Main Methods:
- Screened sixty blood cell types and biochemistries, plus body mass index, in critically ill COVID-19 cases and mild controls.
- Utilized a novel methodology focusing on disease-causing traits beyond direct genetic associations.
- Validated identified drug targets, CDK6 and janus kinase (JAK) inhibitors, using an ex vivo neutrophil extracellular trap (NET) formation assay.
Main Results:
- High neutrophil cell count was identified as a potential causal trait for critical COVID-19 illness.
- CDK6 and janus kinase (JAK) inhibitors were identified as promising therapeutic targets.
- The identified targets demonstrated efficacy in an ex vivo neutrophil extracellular trap (NET) formation assay, validating the methodology.
Conclusions:
- The study presents a powerful new methodology for drug target identification by analyzing large disease-causing trait datasets.
- High neutrophil count is implicated as a key trait in severe COVID-19, suggesting potential therapeutic avenues.
- CDK6 and JAK inhibitors show promise for repurposing as treatments for critical COVID-19, supported by experimental validation.
More Related Videos
Related Concept Videos
Single Nucleotide Polymorphisms-SNPs
Causality in Epidemiology
Types of Biopharmaceutical Studies: Controlled and Non-Controlled Approaches
Non-controlled studies, commonly employed for initial exploration, lack a control group, rendering them susceptible to biases and external influences. In contrast,...
Steps in Outbreak Investigation
Pulmonary Tuberculosis I
Causative Organism
The primary infectious agent causing tuberculosis is Mycobacterium tuberculosis, a slow-growing, acid-fast, aerobic rod that exhibits sensitivity to heat and ultraviolet light. Instances of Mycobacterium bovis and Mycobacterium avium contributing to the development of TB infection are rare.
Mode of...
Analysis of Population Pharmacokinetic Data

