Exploring disease-causing traits for drug repurposing in critically ill COVID-19 patients: A causal inference

Hannes A Baukmann1, Justin L Cope1, Colin Bannard2

  • 1biotx.ai GmbH, Am Mühlenberg 11, 14476 Potsdam, Germany.

Iscience
|November 15, 2023
PubMed

Insights

This study identifies high neutrophil count as a trait linked to critical COVID-19 illness. It suggests CDK6 and janus kinase (JAK) inhibitors as potential drug repurposing targets for treating severe COVID-19.

Area of Science:

  • Immunology
  • Genetics
  • Pharmacology

Background:

  • Effective treatments for critically ill COVID-19 patients are still needed, even with vaccine development.
  • Genome-wide association studies (GWASs) can identify drug repurposing targets but often lack direct causal links to disease.
  • Identifying disease-causing traits beyond immediate genetics is crucial for effective drug discovery.

Purpose of the Study:

  • To develop and validate an alternative method for identifying drug repurposing targets for critical COVID-19.
  • To investigate disease-causing traits associated with severe COVID-19 illness.
  • To identify specific molecular targets and therapeutic agents for COVID-19 treatment.

Main Methods:

  • Screened sixty blood cell types and biochemistries, plus body mass index, in critically ill COVID-19 cases and mild controls.
  • Utilized a novel methodology focusing on disease-causing traits beyond direct genetic associations.
  • Validated identified drug targets, CDK6 and janus kinase (JAK) inhibitors, using an ex vivo neutrophil extracellular trap (NET) formation assay.

Main Results:

  • High neutrophil cell count was identified as a potential causal trait for critical COVID-19 illness.
  • CDK6 and janus kinase (JAK) inhibitors were identified as promising therapeutic targets.
  • The identified targets demonstrated efficacy in an ex vivo neutrophil extracellular trap (NET) formation assay, validating the methodology.

Conclusions:

  • The study presents a powerful new methodology for drug target identification by analyzing large disease-causing trait datasets.
  • High neutrophil count is implicated as a key trait in severe COVID-19, suggesting potential therapeutic avenues.
  • CDK6 and JAK inhibitors show promise for repurposing as treatments for critical COVID-19, supported by experimental validation.

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