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Updated: Jul 10, 2025

mirMachine: A One-Stop Shop for Plant miRNA Annotation
Published on: May 1, 2021
JANUS, a spliceosome-associated protein, promotes miRNA biogenesis in Arabidopsis
Mu Li1,2, Huihui Yu1,2, Bangjun Zhou1,2
1Center for Plant Science Innovation, University of Nebraska-Lincoln, Lincoln, NE 68588-0666, USA.
Abstract:
MicroRNAs (miRNAs) are important regulators of genes expression. Their levels are precisely controlled through modulating the activity of the microprocesser complex (MC). Here, we report that JANUS, a homology of the conserved U2 snRNP assembly factor in yeast and human, is required for miRNA accumulation. JANUS associates with MC components Dicer-like 1 (DCL1) and SERRATE (SE) and directly binds the stem-loop of pri-miRNAs. In a hypomorphic janus mutant, the activity of DCL1, the numbers of MC, and the interaction of primary miRNA transcript (pri-miRNAs) with MC are reduced. These data suggest that JANUS promotes the assembly and activity of MC through its interaction with MC and/or pri-miRNAs. In addition, JANUS modulates the transcription of some pri-miRNAs as it binds the promoter of pri-miRNAs and facilitates Pol II occupancy of at their promoters. Moreover, global splicing defects are detected in janus. Taken together, our study reveals a novel role of a conserved splicing factor in miRNA biogenesis.
Insights
JANUS, a splicing factor, is crucial for microRNA (miRNA) accumulation by promoting the microprocesser complex (MC) assembly and activity. It also regulates pri-miRNA transcription, revealing a novel role in miRNA biogenesis.
Area of Science:
- Molecular Biology
- Genetics
- RNA Biology
Background:
- MicroRNAs (miRNAs) are key gene expression regulators.
- Their levels are controlled by the microprocesser complex (MC).
Purpose of the Study:
- To investigate the role of JANUS, a U2 snRNP assembly factor, in miRNA biogenesis.
- To elucidate JANUS's mechanism in regulating miRNA levels.
Main Methods:
- Investigated JANUS's association with MC components (Dicer-like 1 [DCL1] and SERRATE [SE]).
- Analyzed the effect of a hypomorphic janus mutant on MC activity and pri-miRNA processing.
- Examined JANUS's role in pri-miRNA transcription and splicing.
Main Results:
- JANUS associates with DCL1 and SE, and binds pri-miRNA stem-loops.
- In janus mutants, DCL1 activity, MC numbers, and pri-miRNA-MC interactions are reduced.
- JANUS modulates pri-miRNA transcription by facilitating Pol II occupancy.
- Global splicing defects were observed in janus mutants.
Conclusions:
- JANUS is essential for miRNA accumulation by promoting MC assembly and activity.
- JANUS acts as a novel splicing factor involved in miRNA biogenesis.
- JANUS plays a dual role in miRNA regulation, affecting both processing and transcription.
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