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Detection of tuberculosis-associated compounds from human skin by GCxGC-TOFMS
Portia C K Makhubela1, Egmont R Rohwer1, Yvette Naudé1
1Department of Chemistry, University of Pretoria, Private Bag X20, Hatfield, 0028 Pretoria, South Africa.
Human skin volatile organic compounds (VOCs) show promise for diagnosing tuberculosis (TB). This non-invasive method identified specific VOCs that can accurately differentiate between TB-positive and TB-negative individuals.
Area of Science:
- Biochemistry
- Analytical Chemistry
- Medical Diagnostics
Background:
- Tuberculosis (TB) remains a significant global health challenge.
- Accurate and accessible diagnostic methods are crucial for TB control.
- Current diagnostic approaches can be invasive or have limitations.
Purpose of the Study:
- To explore the potential of human skin volatile organic compounds (VOCs) as non-invasive biomarkers for TB diagnosis.
- To identify specific VOCs associated with TB infection.
- To evaluate the diagnostic accuracy of these VOCs using predictive modeling.
Main Methods:
- Utilized a wearable silicone rubber band for non-invasive VOC sampling from human skin.
- Employed comprehensive two-dimensional gas chromatography-time of flight mass spectrometry (GCxGC-TOFMS) for detailed chemical analysis.
- Applied chemometric techniques, including targeted and untargeted screening, and artificial neural network (ANN) modeling for data analysis.
Main Results:
- Identified 27 known TB-associated VOCs and 16 novel potential biomarkers on human skin.
- ANN models demonstrated high diagnostic accuracy: 92% AUROC for targeted analysis (two compounds) and 98.5% AUROC for untargeted analysis (16 features).
- Achieved high sensitivity (100% and 83%) and specificity (94% and 88%) in differentiating TB-positive from TB-negative individuals.
Conclusions:
- Human skin VOCs represent a promising, non-invasive biomarker source for TB diagnosis.
- The identified VOC profiles offer a potential alternative to existing diagnostic methods like breath analysis and GeneXpert.
- Further validation could lead to a simple, accessible TB screening test.
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