Acute expression of human APOBEC3B in mice results in RNA editing and lethality

Alicia Alonso de la Vega1,2, Nuri Alpay Temiz3, Rafail Tasakis4

  • 1Division of Molecular Thoracic Oncology, German Cancer Research Center (DKFZ), Im Neuenheimer Feld 280, 69120, Heidelberg, Germany.

Genome Biology
|November 24, 2023
PubMed
Abstract

Insights

The cytosine deaminase APOBEC3B enzyme drives RNA editing, causing cellular dysfunction and lethality in mice. This study reveals a novel role for APOBEC3B in RNA editing, impacting carcinogenesis.

Area of Science:

  • Biochemistry
  • Molecular Biology
  • Genetics

Background:

  • RNA editing contributes to genetic heterogeneity and diseases like cancer.
  • The cytosine deaminase APOBEC3B is linked to tumor evolution via DNA mutation.
  • APOBEC3B's potential role in RNA editing remained uninvestigated.

Purpose of the Study:

  • To engineer a mouse model for studying human APOBEC3B overexpression.
  • To investigate APOBEC3B's impact on tissue homeostasis.
  • To determine if APOBEC3B functions as a C-to-U RNA editing enzyme.

Main Methods:

  • Developed a novel doxycycline-inducible mouse model for human APOBEC3B.
  • Administered sustained high levels of APOBEC3B to mice.
  • Conducted RNA-sequencing on mouse tissues with high APOBEC3B expression.

Main Results:

  • APOBEC3B overexpression led to rapid cellular fitness decline, organ dysfunction, and lethality.
  • Identified frequent UCC-to-UUC RNA editing events in APOBEC3B-expressing tissues.
  • Observed RNA editing events distinct from genomic DNA alterations.

Conclusions:

  • This study demonstrates a novel deaminase-dependent RNA editing function for APOBEC3B.
  • Established a preclinical tool for investigating APOBEC3B's role in carcinogenesis.
  • Highlights APOBEC3B as a potential driver of cancer development through RNA editing.

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