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Image reconstruction using UNET-transformer network for fast and low-dose PET scans.

Sanaz Kaviani1, Amirhossein Sanaat2, Mersede Mokri1

  • 1Faculty of Medicine, University of Montreal, Montreal, Canada; University of Montreal Hospital Research Centre (CRCHUM), Montreal, Canada.

Computerized Medical Imaging and Graphics : the Official Journal of the Computerized Medical Imaging Society
|November 25, 2023
PubMed
Summary

This study introduces TrUNET-MAPEM, a deep learning model for low-count Positron Emission Tomography (PET) imaging. The novel approach enhances image quality by reducing noise while preserving crucial details, improving diagnostic accuracy.

Keywords:
Deep learning reconstructionLow-dose and fast PET scanPosteriori expectation maximization (MAPEM)Transformer networks

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Area of Science:

  • Medical Imaging
  • Deep Learning
  • Computational Science

Background:

  • Low-dose and fast Positron Emission Tomography (PET) imaging is vital for patient safety and comfort.
  • Reconstructing high-quality images from low-count PET data is challenging due to noise and limited data.
  • Effective denoising and image enhancement are critical for accurate PET scan interpretation.

Purpose of the Study:

  • To develop an accurate deep learning-based method for low-count PET image reconstruction.
  • To improve the quality of reconstructed PET images by reducing noise and preserving fine details.
  • To combine the strengths of UNET and Transformer networks for enhanced PET image reconstruction.

Main Methods:

  • The TrUNET-MAPEM model integrates a UNET-transformer regularizer with the maximum a posteriori expectation maximization (MAPEM) algorithm.
  • A loss function combining structural similarity index (SSIM) and mean squared error (MSE) was used for accuracy evaluation.
  • Performance was assessed using simulated (Brainweb phantom) and real patient data (Siemens Biograph mMR), compared against OSEM, MAPOSEM, and 3D-UNET.

Main Results:

  • TrUNET-MAPEM achieved superior performance on both simulated and real patient data compared to state-of-the-art methods.
  • For patient data, the model yielded an average PSNR of 33.72 dB, SSIM of 0.955, and rRMSE of 0.39.
  • The model successfully reconstructed smooth images while preserving essential features like edges, outperforming other methods across all evaluated metrics.

Conclusions:

  • The TrUNET-MAPEM model represents a significant advancement in low-count PET image reconstruction.
  • The approach offers potential clinical applications for early disease detection and diagnosis.
  • Results indicate superior noise reduction and edge preservation compared to existing algorithms.