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Targeting the lipid kinase PIKfyve upregulates surface expression of MHC class I to augment cancer immunotherapy
Yi Bao1,2, Yuanyuan Qiao1,2,3, Jae Eun Choi1,2
1Michigan Center for Translational Pathology, University of Michigan, Ann Arbor, MI 48109.
Abstract:
Despite the remarkable clinical success of immunotherapies in a subset of cancer patients, many fail to respond to treatment and exhibit resistance. Here, we found that genetic or pharmacologic inhibition of the lipid kinase PIKfyve, a regulator of autophagic flux and lysosomal biogenesis, upregulated surface expression of major histocompatibility complex class I (MHC-I) in cancer cells via impairing autophagic flux, resulting in enhanced cancer cell killing mediated by CD8+ T cells. Genetic depletion or pharmacologic inhibition of PIKfyve elevated tumor-specific MHC-I surface expression, increased intratumoral functional CD8+ T cells, and slowed tumor progression in multiple syngeneic mouse models. Importantly, enhanced antitumor responses by Pikfyve-depletion were CD8+ T cell- and MHC-I-dependent, as CD8+ T cell depletion or B2m knockout rescued tumor growth. Furthermore, PIKfyve inhibition improved response to immune checkpoint blockade (ICB), adoptive cell therapy, and a therapeutic vaccine. High expression of PIKFYVE was also predictive of poor response to ICB and prognostic of poor survival in ICB-treated cohorts. Collectively, our findings show that targeting PIKfyve enhances immunotherapies by elevating surface expression of MHC-I in cancer cells, and PIKfyve inhibitors have potential as agents to increase immunotherapy response in cancer patients.
Insights
Targeting the lipid kinase PIKfyve enhances cancer immunotherapy by increasing cancer cells' surface expression of major histocompatibility complex class I (MHC-I). This boosts CD8+ T cell-mediated killing and improves responses to various immunotherapies.
Area of Science:
- Immunology
- Oncology
- Cell Biology
Background:
- Immunotherapies show success but face resistance in many cancer patients.
- PIKfyve regulates autophagic flux and lysosomal biogenesis.
- Upregulating MHC-I expression is crucial for effective anti-cancer T cell responses.
Purpose of the Study:
- To investigate the role of PIKfyve in regulating MHC-I expression and anti-cancer immunity.
- To determine if inhibiting PIKfyve can enhance the efficacy of cancer immunotherapies.
Main Methods:
- Genetic depletion and pharmacologic inhibition of PIKfyve in cancer cells and mouse models.
- Assessment of surface MHC-I expression using flow cytometry.
- Evaluation of CD8+ T cell infiltration and function within tumors.
- Testing the efficacy of PIKfyve inhibition in combination with immune checkpoint blockade, adoptive cell therapy, and therapeutic vaccines.
Main Results:
- PIKfyve inhibition, via genetic or pharmacologic means, increased surface MHC-I expression on cancer cells.
- This led to enhanced CD8+ T cell-mediated cancer cell killing and slowed tumor progression in mouse models.
- PIKfyve inhibition improved responses to multiple forms of immunotherapy and was dependent on CD8+ T cells and MHC-I.
- High PIKFYVE expression correlated with poor response to immune checkpoint blockade and survival.
Conclusions:
- Targeting PIKfyve enhances anti-tumor immunity by upregulating cancer cell MHC-I expression.
- PIKfyve inhibition represents a promising strategy to overcome immunotherapy resistance.
- PIKfyve inhibitors could be developed as agents to improve patient responses to existing immunotherapies.
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