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Updated: Jul 23, 2026

Identification of Rare Bacterial Pathogens by 16S rRNA Gene Sequencing and MALDI-TOF MS
Published on: July 11, 2016
Isolation and identification of pathogens of Morchella sextelata bacterial disease
Xuetai Zhu1, Kaili Ma1, Mingyue Sun1
1College of Life Sciences, Northwest Normal University, Lanzhou, China.
Abstract:
Morel mushroom (Morchella spp.) is a rare edible and medicinal fungus distributed worldwide. It is highly desired by the majority of consumers. Bacterial diseases have been commonly observed during artificial cultivation of Morchella sextelata. Bacterial pathogens spread rapidly and cause a wide range of infections, severely affecting the yield and quality of M. sextelata. In this study, two strains of bacterial pathogens, named M-B and M-5, were isolated, cultured, and purified from the tissues of the infected M. sextelata. Koch's postulates were used to determine the pathogenicity of bacteria affecting M. sextelata, and the pathogens were identified through morphological observation, physiological and biochemical analyses, and 16S rRNA gene sequence analysis. Subsequently, the effect of temperature on the growth of pathogenic bacteria, the inhibitory effect of the bacteria on M. sextelata on plates, and the changes in mycelial morphology of M. sextelata mycelium were analyzed when M. sextelata mycelium was double-cultured with pathogenic bacteria on plates. The results revealed that M-B was Pseudomonas chlororaphis subsp. aureofaciens and M-5 was Bacillus subtilis. Strain M-B started to multiply at 10-15°C, and strain M-5 started at 15-20°C. On the plates, the pathogenic bacteria also produced significant inhibition of M. sextelata mycelium, and the observation of mycelial morphology under the scanning electron microscopy revealed that the inhibited mycelium underwent obvious drying and crumpling, and the healthy mycelium were more plump. Thus, this study clarified the pathogens, optimal growth environment, and characteristics of M. sextelata bacterial diseases, thereby providing valuable basic data for the disease prevention and control of Morchella production.
Insights
Two bacterial pathogens, Pseudomonas chlororaphis subsp. aureofaciens and Bacillus subtilis, were identified as causing diseases in cultivated morel mushrooms (Morchella sextelata). This research provides key data for managing these significant fungal infections.
Area of Science:
- Mycology
- Bacteriology
- Plant Pathology
Background:
- Morel mushrooms (Morchella spp.) are highly valued edible and medicinal fungi globally.
- Bacterial diseases pose a significant threat to the artificial cultivation of Morchella sextelata, impacting yield and quality.
Purpose of the Study:
- To isolate, identify, and characterize bacterial pathogens affecting Morchella sextelata.
- To investigate the optimal growth conditions for these pathogens and their inhibitory effects on morel mycelium.
Main Methods:
- Isolation and purification of bacterial strains (M-B and M-5) from infected M. sextelata.
- Pathogenicity confirmation using Koch's postulates.
- Bacterial identification via morphology, biochemical tests, and 16S rRNA sequencing.
- Analysis of pathogen growth at different temperatures and their impact on M. sextelata mycelium through co-culturing and scanning electron microscopy.
Main Results:
- Identified M-B as Pseudomonas chlororaphis subsp. aureofaciens and M-5 as Bacillus subtilis.
- Determined optimal growth temperatures: 10-15°C for M-B and 15-20°C for M-5.
- Observed significant inhibition of M. sextelata mycelial growth and morphological changes (drying, crumpling) upon exposure to pathogens.
Conclusions:
- This study elucidates the specific bacterial pathogens responsible for M. sextelata diseases.
- Provides crucial data on pathogen growth parameters and their detrimental effects on morel mycelium.
- Offers foundational information for developing effective disease management strategies in morel cultivation.
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