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Optimal decision-making in high-throughput virtual screening pipelines.

Hyun-Myung Woo1, Xiaoning Qian2,3, Li Tan3

  • 1Department of Biomedical & Robotics Engineering, Incheon National University, Incheon 22012, Republic of Korea.

Patterns (New York, N.Y.)
|November 30, 2023
PubMed
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This summary is machine-generated.

This study introduces an optimal framework for high-throughput virtual screening (HTVS) using multi-fidelity models. It accelerates screening by efficiently allocating computational resources, balancing accuracy and speed.

Area of Science:

  • Computational chemistry
  • Materials science
  • Drug discovery

Background:

  • Efficient screening of molecular candidates is crucial for drug discovery and materials design.
  • Large search spaces and high-fidelity model costs hinder practical screening.

Purpose of the Study:

  • To develop a general framework for constructing and optimizing high-throughput virtual screening (HTVS) pipelines.
  • To optimally allocate computational resources among multi-fidelity models for improved efficiency.

Main Methods:

  • Proposed a framework for HTVS pipelines utilizing multi-fidelity models.
  • Developed an optimal resource allocation strategy based on model cost and accuracy.
  • Validated the framework using simulated and real-world data.
Keywords:
HTSHTVSROCIhigh-throughput screeninghigh-throughput virtual screening pipelineoptimal computational campaignoptimal decision-makingoptimal screeningreturn on computational investment

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Main Results:

  • Demonstrated significant acceleration of virtual screening processes.
  • Achieved acceleration without compromising predictive accuracy.
  • Enabled adaptive strategies to trade accuracy for computational efficiency.

Conclusions:

  • The proposed optimal HTVS framework enhances computational screening efficiency.
  • The framework offers flexibility in balancing accuracy and speed for virtual screening tasks.
  • This approach is valuable for accelerating discovery in fields like drug development and materials design.