Molecular docking-based screening of methicillin-resistant Staphylococcus aureus FEM proteins with FDA-approved drugs

Anjini Gayatri Akkiraju1, Aishwaraya Badugu1, Aditi Das1

  • 1Molecular Medicine Lab, Department of Genetics & Biotechnology, Osmania University, Hyderabad, Telangana, 500007, India.

Bioinformation
|December 4, 2023
PubMed

Insights

Antibiotic resistance is a major health threat. Researchers identified FDA-approved drugs and similar molecules that inhibit FEM proteins, crucial for bacterial survival and antibiotic resistance, offering a basis for new antimicrobial drug development.

Area of Science:

  • Microbiology and Infectious Diseases
  • Drug Discovery and Development
  • Computational Chemistry

Background:

  • Antibiotic resistance represents a critical global public health crisis.
  • Folic acid and Methanol (FEM) proteins are essential for bacterial cell wall biosynthesis, specifically the pentaglycine cross-bridge formation in peptidoglycan.
  • Due to their necessity for bacterial survival and role in antibiotic resistance, FEM proteins are attractive targets for novel antibacterial agents.

Purpose of the Study:

  • To identify potential inhibitors of FEM proteins using virtual screening.
  • To evaluate FDA-approved drugs and structurally similar molecules for their ability to inhibit FEM proteins.
  • To analyze the inhibitory affinity and pharmacokinetic properties (ADMET) of selected drug candidates.

Main Methods:

  • Virtual screening of a library of FDA-approved drugs and their analogs.
  • In silico analysis of inhibitory affinity against FEM proteins.
  • Assessment of Absorption, Distribution, Metabolism, Excretion, and Toxicity (ADMET) properties for pharmacokinetic profiling.

Main Results:

  • Successful identification and selection of several FDA-approved drugs and related molecules demonstrating potential as FEM protein inhibitors.
  • Quantitative analysis of binding affinity and predicted pharmacokinetic profiles for the identified compounds.
  • The study provides a data-driven foundation for further development of FEM protein-targeting antimicrobials.

Conclusions:

  • Virtual screening effectively identified existing drugs and novel analogs with potential to inhibit FEM proteins.
  • The selected compounds exhibit promising inhibitory affinity and favorable ADMET properties, warranting further investigation.
  • This research lays the groundwork for designing innovative antimicrobial therapies to combat antibiotic resistance.