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Published on: April 6, 2016
E3 ubiquitin ligases in lung cancer: Emerging insights and therapeutic opportunities
Bhaskar Basu1, Satadeepa Kal1, Subhajit Karmakar1
1Cancer Biology and Inflammatory Disorder Division, Council of Scientific and Industrial Research-Indian Institute of Chemical Biology (CSIR-IICB), TRUE Campus, CN-6, Sector-V, Salt Lake, Kolkata- 700091 & 4, Raja S.C. Mullick Road, Jadavpur, Kolkata 700032, India.
Abstract:
Aim In this review, we have attempted to provide the readers with an updated account of the role of a family of proteins known as E3 ligases in different aspects of lung cancer progression, along with insights into the deregulation of expression of these proteins during lung cancer. A detailed account of the therapeutic strategies involving E3 ligases that have been developed or currently under development has also been provided in this review. MATERIALS AND METHODS: The review article employs extensive literature search, along with differential gene expression analysis of lung cancer associated E3 ligases using the DESeq2 package in R, and the Gene Expression Profiling Interactive Analysis (GEPIA) database (http://gepia.cancer-pku.cn/). Protein expression analysis of CPTAC lung cancer samples was carried out using the UALCAN webtool (https://ualcan.path.uab.edu/index.html). Assessment of patient overall survival (OS) in response to high and low expression of selected E3 ligases was performed using the online Kaplan-Meier plotter (https://kmplot.com/analysis/index.php?p=background). KEY FINDINGS: SIGNIFICANCE: The review provides an in-depth understanding of the role of E3 ligases in lung cancer progression and an up-to-date account of the different therapeutic strategies targeting oncogenic E3 ligases for improved lung cancer management.
Insights
E3 ligases are crucial in lung cancer progression. This review details their roles and therapeutic strategies targeting them for improved lung cancer treatment.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- E3 ligases are a protein family involved in protein ubiquitination.
- Their expression is frequently deregulated in various cancers, including lung cancer.
Purpose of the Study:
- To provide an updated account of E3 ligase roles in lung cancer progression.
- To review therapeutic strategies targeting E3 ligases in lung cancer.
Main Methods:
- Extensive literature search.
- Differential gene expression analysis using DESeq2 and GEPIA database.
- Protein expression analysis using UALCAN webtool.
- Overall survival assessment using Kaplan-Meier plotter.
Main Results:
- E3 ligases play significant roles in lung cancer progression.
- Deregulation of E3 ligase expression is observed in lung cancer.
- Several therapeutic strategies targeting E3 ligases are under development.
Conclusions:
- E3 ligases are critical regulators in lung cancer.
- Targeting oncogenic E3 ligases offers promising therapeutic avenues for lung cancer management.
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