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Updated: Jul 9, 2025

Deep Proteome Profiling by Isobaric Labeling, Extensive Liquid Chromatography, Mass Spectrometry, and Software-assisted Quantification
Published on: November 15, 2017
Mass Spectrometry in Proteomics: Technologies, Methods, and Research Applications for the Life Sciences
Paolo Nanni1, Peter Gehrig2, Ralph Schlapbach3
1Functional Genomics Center Zurich, University of Zurich / ETH Zurich. paolo.nanni@fgcz.uzh.ch.
Mass spectrometry is vital for life sciences, especially proteomics. This review covers its applications, lab setup considerations, and the roles of core facilities and service providers.
Area of Science:
- Life Sciences
- Biochemistry
- Analytical Chemistry
Background:
- Mass spectrometry (MS) is a key technology for analyzing biomolecules like proteins, peptides, metabolites, lipids, and glycans.
- Continuous development of novel MS methods drives advancements in life science research.
Purpose of the Study:
- To review the significance of mass spectrometry in the life science sector.
- To highlight current applications of MS, particularly in proteomics.
- To provide guidance on establishing MS laboratories and discuss the roles of support facilities.
Main Methods:
- Review of current literature on mass spectrometry applications in life sciences and proteomics.
- Discussion of practical aspects for setting up mass spectrometry laboratories.
- Analysis of the contributions of academic core facilities and industrial service providers.
Main Results:
- Mass spectrometry is indispensable for comprehensive biomolecular investigation.
- Proteomics is a major beneficiary of advanced MS techniques.
- Strategic planning and access to specialized facilities are crucial for effective MS utilization.
Conclusions:
- Mass spectrometry is a cornerstone technology in modern life sciences, with proteomics as a rapidly advancing field.
- Careful consideration of laboratory setup and leveraging core facilities/service providers are essential for maximizing MS capabilities.
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