Related Experiment Video
Updated: Jul 8, 2025

10:59
Artificial RNA Polymerase II Elongation Complexes for Dissecting Co-transcriptional RNA Processing Events
Published on: May 13, 2019
9.7K
RNA polymerase II transcription with partially assembled TFIID complexes.
Vincent Hisler1,2,3,4, Paul Bardot1,2,3,4, Dylane Detilleux1,2,3,4
1Université de Strasbourg, IGBMC UMR 7104- UMR-S 1258, F-67400 Illkirch, France.
Biorxiv : the Preprint Server for Biology
|December 11, 2023
Summary
Partially assembled TFIID complexes, lacking TAF7 or TAF10, can initiate RNA polymerase II transcription. However, these TFIID variants do not fully replace holo-TFIID during development.
Area of Science:
- Molecular Biology
- Gene Regulation
- Developmental Biology
Background:
- RNA polymerase II (Pol II) transcription initiation is crucial for gene expression.
- The general transcription factor TFIID recognizes core promoter sequences.
- Metazoan holo-TFIID comprises TATA-binding protein (TBP) and 13 TBP-associated factors (TAFs).
Conclusions:
- Partially assembled TFIID complexes are capable of sustaining basal Pol II transcription initiation.
- Complete holo-TFIID function is essential for long-term cellular viability and development.
- TAF7 and TAF10 are critical for the integrity and full functionality of TFIID beyond initial transcription steps.
Related Concept Videos
General Transcription Factors
5.3K
Tissue-specific transcription factors contribute to diverse cellular functions in mammals. For example, the gene for beta globin, a major component of hemoglobin, is present in all cells of the body. However, it is only expressed in red blood cells because the transcription factors that can bind to the promoter sequences of the beta globin gene are only expressed in these cells. Tissue-specific transcription factors also ensure that mutations in these factors may impair only the function of...
5.3K
Transcription Initiation
16.4K
Initiation is the first step of transcription in eukaryotes. Prokaryotic RNA Polymerase (RNAP) can bind to the template DNA and start transcribing. On the other hand, transcription in eukaryotes requires additional proteins, called transcription factors, to first bind to the promoter region in the DNA template. This binding helps recruit the specific RNAP that can assemble on the DNA and start transcription.
The promoters and enhancers and their accessory proteins allow tight regulation of...
The promoters and enhancers and their accessory proteins allow tight regulation of...
16.4K
Eukaryotic RNA Polymerases
24.2K
RNA Polymerase (RNAP) is conserved in all animals, with bacterial, archaeal, and eukaryotic RNAPs sharing significant sequence, structural, and functional similarities. Among the three eukaryotic RNAPs, RNA Polymerase II is most similar to bacterial RNAP in terms of both structural organization and folding topologies of the enzyme subunits. However, these similarities are not reflected in their mechanism of action.
All three eukaryotic RNAPs require specific transcription factors, of which the...
All three eukaryotic RNAPs require specific transcription factors, of which the...
24.2K
Transcription Elongation Factors
10.9K
Transcription elongation is a dynamic process that alters depending upon the sequence heterogeneity of the DNA being transcribed. Hence, it is not surprising that the elongation complex's composition also varies along the way while transcribing a gene.
The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA...
The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA...
10.9K
RNA Polymerase II Accessory Proteins
9.2K
Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...
9.2K
Bacterial Transcription
28.3K
RNA polymerase (RNAP) carries out DNA-dependent RNA synthesis in both bacteria and eukaryotes. Bacteria do not have a membrane-bound nucleus. So, transcription and translation occur simultaneously, on the same DNA template.
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
28.3K

