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Updated: Jul 8, 2025

Affinity Purification of Influenza Virus Ribonucleoprotein Complexes from the Chromatin of Infected Cells
Published on: June 3, 2012
N-terminal acetylation controls multiple functional aspects of the influenza A virus ribonuclease PA-X
Raecliffe E Daly1,2, Idalia Myasnikov2,3, Marta Maria Gaglia2
1Program in Cellular, Molecular and Developmental Biology, Tufts University Graduate School of Biomedical Sciences, Boston, MA, 02111, United States.
Abstract:
To counteract host antiviral responses, influenza A virus triggers a global reduction of cellular gene expression, a process termed "host shutoff." A key effector of influenza A virus host shutoff is the viral endoribonuclease PA-X, which degrades host mRNAs. While many of the molecular determinants of PA-X activity remain unknown, a previous study found that N-terminal acetylation of PA-X is required for its host shutoff activity. However, it remains unclear how this co-translational modification promotes PA-X activity. Here, we report that PA-X N-terminal acetylation has two functions that can be separated based on whether acetylation occurs on the first amino acid, the initiator methionine, or the second amino acid following initiator methionine excision. Modification at either site is sufficient to ensure PA-X localization to the nucleus. However, modification of the second amino acid is not sufficient for host shutoff activity of ectopically expressed PA-X, which specifically requires N-terminal acetylation of the initiator methionine. Interestingly, during infection N-terminal acetylation of PA-X at any position results in host shutoff activity, suggesting that additional factors during infection can augment the host shutoff activity of PA-X. Our studies thus uncover a multifaceted role for PA-X N-terminal acetylation in regulation of this important immunomodulatory factor.
Insights
Influenza A virus PA-X protein uses N-terminal acetylation for host shutoff. Acetylation of the initiator methionine is crucial for PA-X activity and nuclear localization, revealing a complex regulatory mechanism.
Area of Science:
- Virology
- Molecular Biology
- Host-Pathogen Interactions
Background:
- Influenza A virus employs a
Purpose of the Study:
- To elucidate the molecular mechanisms by which N-terminal acetylation of the influenza A virus PA-X protein regulates its host shutoff activity.
- To investigate the distinct roles of N-terminal acetylation at different positions on PA-X in mediating its functions.
Main Methods:
- Site-directed mutagenesis to alter N-terminal acetylation sites on PA-X.
- Analysis of PA-X localization using microscopy.
- Assessment of host shutoff activity in cells expressing modified PA-X.
- Investigation of interactions between PA-X and influenza protein NS1.
Main Results:
- N-terminal acetylation of PA-X at either the initiator methionine or the second amino acid promotes nuclear localization.
- Acetylation of the initiator methionine is essential for PA-X host shutoff activity in ectopically expressed systems.
- During infection, N-terminal acetylation at any position confers host shutoff activity, partly through interaction with NS1.
- PA-X N-terminal acetylation plays a multifaceted role in regulating viral activity and host immune response.
Conclusions:
- N-terminal acetylation of influenza A virus PA-X is a critical regulatory mechanism with distinct functions depending on the acetylation site.
- The initiator methionine acetylation is specifically required for PA-X host shutoff function, while other sites facilitate nuclear import.
- Functional interaction with NS1 contributes to PA-X activity during infection, highlighting a coordinated viral strategy.
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