Genomic and biological characteristics of a novel lytic phage, vB_MscM-PMS3, infecting the opportunistic zoonotic

Hyemin Kwon1, Seon Young Park2, Seungki Lee3

  • 1Department of Microbiology and Molecular Biology, College of Bioscience and Biotechnology, Chungnam National University, Daejeon, 34134, Republic of Korea.

Archives of Virology
|December 11, 2023
PubMed

Insights

Researchers discovered a novel bacteriophage, vB_MscM-PMS3, capable of infecting and lysing Mammaliicoccus sciuri, an opportunistic pathogen. This unique phage exhibits distinct genomic and phylogenetic characteristics, setting it apart from known relatives.

Area of Science:

  • Microbiology and Virology
  • Bacteriophage Research
  • Genomic Analysis

Background:

  • Mammaliicoccus sciuri is recognized as an opportunistic zoonotic pathogen affecting both humans and animals.
  • The need for novel antimicrobial strategies against such pathogens is growing.

Purpose of the Study:

  • To isolate and characterize a novel bacteriophage with lytic activity against Mammaliicoccus sciuri.
  • To determine the genomic and phylogenetic uniqueness of the isolated phage.

Main Methods:

  • Isolation and purification of bacteriophage vB_MscM-PMS3.
  • Determination of host range, including infection and lysis capabilities against M. sciuri and M. lentus.
  • Whole-genome sequencing and bioinformatic analysis, including ORF identification and tRNA gene detection.
  • Phylogenetic analysis using whole-genome data and major capsid protein sequences.

Main Results:

  • The isolated phage, vB_MscM-PMS3, demonstrated the ability to infect and lyse M. sciuri and M. lentus.
  • The phage possesses a linear double-stranded DNA genome of 147,811 bp, encoding 206 ORFs and three tRNA genes.
  • Genomic analysis revealed low coverage (<17%) and sequence identity (<91.3%) compared to other known phage genomes.
  • Phylogenetic analysis placed vB_MscM-PMS3 within the Twortvirinae subfamily (Herelleviridae) but distinctly separated from other members.

Conclusions:

  • Bacteriophage vB_MscM-PMS3 represents a novel phage with significant lytic activity against M. sciuri.
  • The unique genomic and phylogenetic profile of vB_MscM-PMS3 highlights its distinct evolutionary lineage.
  • This discovery contributes to the understanding of phage diversity and offers potential for phage therapy applications.