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Updated: Jul 8, 2025

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Multicolor Flow Cytometry-based Quantification of Mitochondria and Lysosomes in T Cells
Published on: January 9, 2019
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Fluorescent characterization of differentiated myotubes using flow cytometry.
Andy Nolan1,2, Robert A Heaton2, Petra Adamova3
1Research Institute for Sport and Exercise Sciences, Liverpool John Moores University, Liverpool, UK.
Summary
Flow cytometry can successfully analyze skeletal muscle progenitor cells (myoblasts) and differentiated myotubes. Key differences in mitochondrial mass, reactive oxygen species, and DNA content distinguish myotubes, despite similar sizes detected by laser scatter.
Area of Science:
- Cell Biology
- Skeletal Muscle Research
- Flow Cytometry Applications
Background:
- Flow cytometry is standard for assessing myoblast populations.
- A comprehensive gating strategy for differentiated myotubes using flow cytometry is lacking.
- Myotubes exhibit significant metabolic and protein changes compared to myoblasts.
Purpose of the Study:
- To establish the utility of flow cytometry for analyzing both myoblasts and myotubes.
- To characterize morphological and metabolic differences between myoblasts and myotubes.
- To develop a gating strategy for myotube identification within heterogeneous cell suspensions.
Main Methods:
- C2C12 murine cells were analyzed for morphology and metabolic reprogramming using flow cytometry.
- Laser scatter (FSC/SSC) measured cell morphology; fluorescent probes quantified mitochondrial mass, ROS, and DNA content.
- Immunophenotyping for myosin heavy chain (MyHC) confirmed differentiation; viability was assessed using Annexin V/propidium iodide.
Main Results:
- Myotubes showed significantly higher mitochondrial mass (159%), ROS production (303%), DNA content (18%), and MyHC expression (147%) compared to myoblasts.
- Laser scatter indicated similar sizes for myoblasts and myotubes, but 'rolled-up' myotube morphology altered scatter properties.
- Myotubes displayed greater heterogeneity, with two distinct sub-populations identified, one viable and one likely containing apoptotic bodies.
Conclusions:
- Flow cytometry is effective for analyzing myotubes, with increased mitochondrial mass, ROS, and DNA content being key identifiers correlating with MyHC expression.
- Myotube 'rolling up' during analysis complicates size determination via laser scatter, necessitating alternative identification strategies.
- Acoustic focusing may be superior to hydrodynamic focusing for resolving distinct myotube sub-populations due to their heterogeneity.
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