Related Experiment Video
Updated: Jul 8, 2025

Measuring Single-Cell Mitochondrial DNA Copy Number and Heteroplasmy Using Digital Droplet Polymerase Chain Reaction
Published on: July 12, 2022
Mitochondrial DNA copy number variation across three generations: a possible biomarker for assessing perinatal
Hisanori Fukunaga1,2, Atsuko Ikeda3,4
1Center for Environmental and Health Sciences, Hokkaido University, N12 W7 Kita-ku, Sapporo, 060-0812, Japan. hisanori.fukunaga@hs.hokudai.ac.jp.
Background:
Mitochondria have their own circular multi-copy genome (mtDNA), and abnormalities in the copy number are implicated in mitochondrial dysfunction, which contributes to a variety of aging-related pathologies. However, not much is known about the genetic correlation of mtDNA copy number across multiple generations and its physiological significance.
Methods:
We measured the mtDNA copy number in cord blood or peripheral blood from 149 three-generation families, specifically the newborns, parents, and grandparents, of 149 families, totaling 1041 individuals. All of the biological specimens and information were provided by the Tohoku Medical Megabank Project in Japan. We also analyzed their maternal factors during pregnancy and neonatal outcomes.
Results:
While the maternal peripheral blood mtDNA copy number was lower than that of other adult family members, it was negatively correlated with cord blood mtDNA copy number in male infants. Also, cord blood mtDNA copy numbers were negatively correlated with perinatal outcomes, such as gestation age, birth weight, and umbilical cord length, for both male and female neonates. Furthermore, the mtDNA copy number in the infants born to mothers who took folic acid supplements during pregnancy would be lower than in the infants born to mothers who did not take them.
Conclusions:
This data-driven study offers the most comprehensive view to date on the genetic and physiological significance of mtDNA copy number in cord blood or peripheral blood taken from three generations, totaling more than 1000 individuals. Our findings indicate that mtDNA copy number would be one of the transgenerational biomarkers for assessing perinatal outcomes, as well as that appropriate medical interventions could improve the outcomes via quantitative changes in mtDNA.
Insights
Mitochondrial DNA (mtDNA) copy number varies across generations and is linked to birth outcomes. This study suggests mtDNA copy number could serve as a biomarker for assessing perinatal health.
Area of Science:
- Genetics
- Mitochondrial Biology
- Perinatal Medicine
Background:
- Mitochondrial DNA (mtDNA) copy number abnormalities are linked to aging pathologies.
- The transgenerational genetic correlation and physiological significance of mtDNA copy number remain largely unknown.
Purpose of the Study:
- To investigate the genetic correlation of mtDNA copy number across three generations.
- To explore the physiological significance of mtDNA copy number in relation to maternal factors and neonatal outcomes.
Main Methods:
- Measured mtDNA copy number in blood samples from 1041 individuals across 149 three-generation families.
- Analyzed maternal factors during pregnancy and neonatal outcomes.
- Utilized data from the Tohoku Medical Megabank Project.
Main Results:
- Maternal peripheral blood mtDNA copy number was lower than other adults and negatively correlated with male infant cord blood mtDNA.
- Cord blood mtDNA copy number negatively correlated with gestational age, birth weight, and umbilical cord length.
- Infants of mothers taking folic acid supplements had lower mtDNA copy numbers.
Conclusions:
- mtDNA copy number is a potential transgenerational biomarker for perinatal outcomes.
- Quantitative changes in mtDNA may be influenced by medical interventions to improve outcomes.
Related Concept Videos
Animal Mitochondrial Genetics
Comparing Copy Number Variations and SNPs
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...
Non-nuclear Inheritance

