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Updated: Jul 8, 2025

Fecal Microbiota Transplantation via Colonoscopy for Recurrent C. difficile Infection
Published on: December 8, 2014
Update on microbiota-derived therapies for recurrent Clostridioides difficile infections.
Nicolas Benech1, Frédéric Barbut2, Fidelma Fitzpatrick3
1French Fecal Transplant Group (GFTF), France; Hepato-Gastroenterology Department, Hôpital de la Croix-Rousse, Hospices Civils de Lyon, CRCL, Lyon, France; Lyon GEM Microbiota Study Group, Lyon, France; ESGHAMI (ESCMID Study Group for Host and Microbiota Interactions); ESGCD (ESCMID Study Group for Clostridioides difficile); Member of the European Fecal Microbiota Transplantation Network.
New microbiota-derived treatments show promise for preventing recurrent Clostridioides difficile infection (rCDI). While effective, their distinct compositions and administration routes require further study to define their role alongside fecal microbiota transplantation (FMT).
Area of Science:
- Microbiome Therapeutics
- Infectious Diseases
- Gastroenterology
Background:
- Faecal microbiota transplantation (FMT) is the standard for recurrent Clostridioides difficile infection (rCDI).
- Commercially developed microbiota-derived products are emerging as alternatives, with distinct compositions and administration routes.
- FDA-approved products include Rebyota (RBX2660) and VOWST (SER-109), with VE303 in Phase III trials.
Purpose of the Study:
- To review and compare microbiota-derived treatments in advanced clinical evaluation for rCDI against FMT.
- To analyze available data on efficacy, safety, and product characteristics of emerging rCDI therapies.
Main Methods:
- Review of Phase II and III clinical trials evaluating microbiota-derived medicinal products for rCDI prevention.
- Comparison of efficacy and safety data against placebo and historical FMT data.
- Analysis of product composition (stool-derived vs. defined consortia) and administration routes.
Main Results:
- RBX2660, SER-109, and VE303 demonstrated efficacy in preventing rCDI in high-risk patients compared to placebo.
- Observed differences in recurrence risk reduction were lower than previously reported for FMT.
- All evaluated treatments exhibited a favorable safety profile, with primarily mild gastrointestinal side effects.
Conclusions:
- Stool-derived products and bacterial consortia require clear differentiation in characterization and risk assessment.
- Long-term post-marketing evaluation is crucial, similar to FMT registries.
- Further research is needed to determine optimal patient populations and administration routes for these novel rCDI therapies.
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