A machine learning approach for quantifying age-related histological changes in the mouse kidney
Susan Sheehan1, Seamus Mawe1, Mandy Chen1
1The Jackson Laboratory, Bar Harbor, ME, 04609, USA.
Geroscience
|December 16, 2023
Summary
This study developed a machine learning model to quantify aging in mouse kidney histology, enabling reproducible health span research. The tool provides quantifiable age scores and insights into age-related image changes.
Area of Science:
- Computational pathology
- Gerontology
- Histology
Background:
- Quantifying age-related histological changes is crucial for evaluating interventions targeting health span.
- Existing methods may lack the reproducibility and throughput needed for large-scale aging studies.
Purpose of the Study:
- To develop and validate a machine learning architecture for quantifying age-related changes in mouse kidney histology.
- To provide reproducible and quantifiable age scores for histological samples.
Main Methods:
- A machine learning architecture was trained to detect and quantify aging in mouse kidney histological samples.
- Model validation was performed using held-out data and compared against pathologist scores from the Geropathology Research Network aging grading scheme.
- Trained classifiers for Hematoxylin and Eosin (H&E)-stained slides were provided, along with tutorials for creating additional classifiers.
Main Results:
- The machine learning model accurately quantified aging-related histological changes in mouse kidneys.
- Model performance correlated well with expert pathologist assessments.
- The approach provided reproducible and quantifiable age scores, independent of specific lesions.
Conclusions:
- The developed machine learning architecture offers a high-throughput solution for quantifying mouse aging studies, particularly in kidney tissues.
- This tool facilitates the evaluation of interventions aimed at extending health span.
- The provided resources enable broader application in histological analysis and classifier development.


