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Assessing spontaneous sensory neuron activity using in vivo calcium imaging
Sonia Ingram1, Kim I Chisholm2, Feng Wang3,4
1Sonia Ingram, Data Scientist, Contract Researcher for King's College London, London, United Kingdom.
Pain
|December 19, 2023
Summary
In vivo calcium imaging offers a skilled-free alternative to study heightened sensory neuron activity in chronic pain models. A machine learning algorithm accurately predicts spontaneous neuronal firing using this imaging technique.
Area of Science:
- Neuroscience
- Pain Research
- Biotechnology
Background:
- Heightened spontaneous activity in sensory neurons is a hallmark of chronic pain.
- Electrophysiology is the traditional method for studying neuronal activity but is technically demanding and prone to bias.
Purpose of the Study:
- To evaluate in vivo calcium imaging with GCaMP6s as an alternative method for assessing spontaneous sensory neuron activity.
- To develop and validate a machine learning algorithm for analyzing this activity.
Main Methods:
- In vivo calcium imaging of the L4 dorsal root ganglion (DRG) in mouse models of inflammatory pain.
- Application of lidocaine to determine baseline calcium levels.
- Training a machine learning algorithm on calcium transient data.
- Validation of the algorithm against visual inspection and across different experimental setups.
Main Results:
- Spontaneously active calcium transients were visualized in the L4 DRG in a mouse model of inflammatory pain.
- A machine learning algorithm achieved high accuracy (90.0% ±1.2 and 85.9% ±2.1) in predicting spontaneous neuronal activity in two pain models.
- The algorithm demonstrated robustness, with high accuracy (94.0% ±2.2) in experiments from a different laboratory and microscope configuration.
Conclusions:
- In vivo calcium imaging is a viable and accurate method for assessing spontaneous activity in sensory neurons.
- The developed machine learning tool provides accessible analysis for researchers studying neuronal activity.
- This approach offers a less biased and more accessible alternative to traditional electrophysiology for pain research.

