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Development of Conformationally Restricted Negamycin Derivatives for Potent Readthrough Activity.

Noriko Omura1, Akihiro Taguchi1, Tomoki Kuwahara2

  • 1Department of Medicinal Chemistry, Tokyo University of Pharmacy and Life Sciences, 1432-1 Horinouchi, Hachioji, Tokyo 192-0392, Japan.

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|December 20, 2023
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Summary

New negamycin derivatives, TCP-304 and TCP-306, show potent readthrough activity for Duchenne muscular dystrophy (DMD) mutations. These conformationally restricted compounds restore dystrophin, offering a promising therapeutic avenue for DMD.

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Area of Science:

  • Medicinal Chemistry
  • Molecular Biology
  • Genetics

Background:

  • Duchenne muscular dystrophy (DMD) is a genetic disorder caused by mutations in the dystrophin gene.
  • (+)-Negamycin and its analogue TCP-107 exhibit readthrough activity, restoring dystrophin.
  • Previous studies indicated TCP-107 has higher readthrough activity than negamycin.

Purpose of the Study:

  • To design and synthesize novel cyclopropane-based, conformationally restricted derivatives of TCP-107.
  • To evaluate the readthrough activity of these derivatives in a cell-based reporter assay for DMD-associated mutations.
  • To identify derivatives with enhanced therapeutic potential for Duchenne muscular dystrophy.

Main Methods:

  • Synthesis of cyclopropane-based conformationally restricted derivatives of TCP-107.
  • Evaluation of readthrough activity using a cell-based reporter assay against TGA-type mutations.
  • Structure-activity relationship analysis of synthesized compounds.

Main Results:

  • A down-cis isomer, TCP-304, demonstrated significant readthrough activity.
  • TCP-306, a derivative acylated with l-α-aminoundecanoic acid, showed approximately three times higher activity than TCP-304.
  • These derivatives exhibited dose-dependent activity and were effective against both TGA and TAG mutations.

Conclusions:

  • Conformational restriction of negamycin derivatives via cyclopropane ring introduction enhances potent readthrough activity.
  • TCP-304 and TCP-306 represent promising candidates for Duchenne muscular dystrophy therapeutic development.
  • The findings suggest a viable strategy for developing novel readthrough compounds for genetic disorders.