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When Yield Prediction Does Not Yield Prediction: An Overview of the Current Challenges
Varvara Voinarovska1,2, Mikhail Kabeshov1, Dmytro Dudenko3
1Molecular AI, Discovery Sciences R&D, AstraZeneca, 431 83 Gothenburg, Sweden.
Machine learning (ML) models struggle with predicting complex chemical properties due to high-dimensional data. This review assesses ML methods in chemoinformatics, highlighting challenges in data availability and transferability for advanced chemical predictions.
Area of Science:
- Chemoinformatics
- Computational Chemistry
- Machine Learning
Background:
- Predicting advanced chemical properties like yield and synthesis feasibility is crucial for chemical research.
- Current machine learning (ML) models face challenges due to the high dimensionality and numerous variables involved in chemical predictions.
Purpose of the Study:
- To systematically evaluate the effectiveness of current ML methodologies in chemoinformatics.
- To identify milestones and limitations of ML in predicting chemical properties.
- To examine data availability and transferability issues through a case study.
Main Methods:
- Systematic review of ML methodologies applied in chemoinformatics.
- Evaluation of ML model performance for predicting chemical properties.
- Case study analysis focusing on data availability and transferability.
Main Results:
- Current ML techniques show promise but face significant hurdles in predicting complex chemical properties.
- High dimensionality and numerous variables (reactants, catalysts, conditions) complicate model development.
- Data availability and transferability remain critical challenges in the field.
Conclusions:
- Reliable ML models can optimize high-throughput experiments and enhance retrosynthetic prediction.
- Further research is needed to address data limitations and improve model generalizability in chemoinformatics.
- Addressing data challenges is key to unlocking the full potential of ML in chemical property prediction.
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