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Updated: Jul 7, 2025

Yeast As a Chassis for Developing Functional Assays to Study Human P53
Published on: August 4, 2019
Disordered regions mediate the interaction of p53 and MRE11
Sinem Usluer1, Markus Galhuber2, Yukti Khanna1
1Division of Molecular Biology and Biochemistry, Gottfried Schatz Research Center for Cell Signaling, Metabolism and Aging, Medical University of Graz, Austria; Research Unit Integrative Structural Biology, Medical University of Graz, Austria.
Abstract:
The genome is frequently targeted by genotoxic agents, resulting in the formation of DNA scars. However, cells employ diverse repair mechanisms to restore DNA integrity. Among these processes, the Mre11-Rad50-Nbs1 complex detects double-strand breaks (DSBs) and recruits DNA damage response proteins such as ataxia-telangiectasia-mutated (ATM) kinase to DNA damage sites. ATM phosphorylates the transactivation domain (TAD) of the p53 tumor suppressor, which in turn regulates DNA repair, growth arrest, apoptosis, and senescence following DNA damage. The disordered glycine-arginine-rich (GAR) domain of double-strand break protein MRE11 (MRE11GAR) and its methylation are important for DSB repair, and localization to Promyelocytic leukemia nuclear bodies (PML-NBs). There is preliminary evidence that p53, PML protein, and MRE11 might co-localize and interact at DSB sites. To uncover the molecular details of these interactions, we aimed to identify the domains mediating the p53-MRE11 interaction and to elucidate the regulation of the p53-MRE11 interaction by post-translational modifications (PTMs) through a combination of biophysical techniques. We discovered that, in vitro, p53 binds directly to MRE11GAR mainly through p53TAD2 and that phosphorylation further enhances this interaction. Furthermore, we found that MRE11GAR methylation still allows for binding to p53. Overall, we demonstrated that p53 and MRE11 interaction is facilitated by disordered regions. We provide for the first time insight into the molecular details of the p53-MRE11 complex formation and elucidate potential regulatory mechanisms that will promote our understanding of the DNA damage response. Our findings suggest that PTMs regulate the p53-MRE11 interaction and subsequently their colocalization to PML-NBs upon DNA damage.
Insights
The study reveals how p53 and MRE11 interact at DNA damage sites. Post-translational modifications like phosphorylation and methylation regulate this crucial interaction, impacting DNA repair and cellular responses.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- Genotoxic agents cause DNA damage, necessitating robust cellular repair mechanisms.
- The Mre11-Rad50-Nbs1 complex and ATM kinase are key players in detecting and responding to DNA double-strand breaks (DSBs).
- p53 tumor suppressor, regulated by ATM, controls critical cellular processes post-DNA damage.
Purpose of the Study:
- To identify the specific domains involved in the interaction between p53 and MRE11.
- To investigate how post-translational modifications (PTMs) regulate the p53-MRE11 interaction.
- To elucidate the molecular mechanisms underlying p53-MRE11 complex formation at DNA damage sites.
Main Methods:
- Utilized biophysical techniques to study protein interactions in vitro.
- Investigated the binding domains of p53 and MRE11.
- Assessed the impact of phosphorylation and methylation on p53-MRE11 binding.
Main Results:
- p53 directly binds to the MRE11 glycine-arginine-rich (GAR) domain, primarily via p53's TAD2 region.
- Phosphorylation of p53 enhances its interaction with MRE11GAR.
- Methylation of MRE11GAR does not prevent binding to p53, indicating complex regulation.
Conclusions:
- The interaction between p53 and MRE11 is mediated by their intrinsically disordered regions.
- PTMs, including phosphorylation and methylation, play a significant role in regulating the p53-MRE11 interaction.
- These findings provide novel insights into the molecular basis of the DNA damage response and potential colocalization to PML-NBs.
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