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Multi-locus sequence typing and phylogenetics of Cryptococcus neoformans AD hybrids.

M Cogliati1, P E Chidebelu2, M Hitchcock3

  • 1Lab. Medical Mycology, Dept. Biomedical Sciences for Health, Università degli Studi di Milano, Milano, Italy.

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Cryptococcus neoformans AD hybrid strains have diverse origins and evolve dynamically. Genotyping these hybrids reveals new genetic diversity, aiding in understanding their evolution and spread globally.

Keywords:
AD hybridsCryptococcus neoformansLoss of heterozygosityMLSTMultiple originPhylogenetics

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Area of Science:

  • Medical Mycology
  • Population Genetics
  • Evolutionary Biology

Background:

  • Hybrid AD strains of Cryptococcus neoformans are globally distributed but poorly understood.
  • Their origins, diversity, and evolutionary dynamics require further investigation.

Purpose of the Study:

  • To analyze the origin, diversity, and evolution of Cryptococcus neoformans AD hybrid strains.
  • To compare AD hybrids with global haploid serotypes A and D strains.

Main Methods:

  • Genotyping of 102 AD hybrid strains from 21 countries using mating type and seven-locus sequencing.
  • Phylogenetic and population genetic analyses of allelic sequences.
  • Comparison of AD hybrids with global haploid serotype A and D strains.

Main Results:

  • Most AD hybrids showed loss of heterozygosity at analyzed loci.
  • Phylogenetic analyses indicated multiple hybrid origins across continents, dating back one million years.
  • Evidence for clonal reproduction, long-distance dispersal, and novel genetic diversity in AD hybrids and haploid populations was found.

Conclusions:

  • AD hybrids can be effectively genotyped using established multi-locus sequencing typing methods.
  • Novel genetic diversity exists in AD hybrids and haploid populations.
  • AD hybrids exhibit multiple origins and dynamic evolution in nature.