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Indirect estimation of pediatric reference interval via density graph deep embedded clustering
Jianguo Zheng1, Yongqiang Tang1, Xiaoxia Peng2
1State Key Laboratory of Multimodal Artificial Intelligence Systems, Institute of Automation, Chinese Academy of Sciences, Beijing, China.
Insights
This study introduces a novel deep graph clustering algorithm to estimate pediatric reference intervals indirectly, addressing a critical gap in China. The method accurately predicts intervals for children, improving clinical decision-making.
Area of Science:
- Biostatistics
- Computational Biology
- Clinical Chemistry
Background:
- Establishing pediatric reference intervals (RIs) is vital for clinical decisions but faces challenges in China.
- Direct sampling for RIs is resource-intensive and ethically complex.
- Indirect estimation methods offer a viable alternative for predicting RIs.
Purpose of the Study:
- To introduce deep graph clustering for the indirect estimation of pediatric reference intervals.
- To propose a novel Density Graph Deep Embedded Clustering (DGDEC) algorithm.
- To address the gap in pediatric RIs in China.
Main Methods:
- Developed the Density Graph Deep Embedded Clustering (DGDEC) algorithm.
- Incorporated a density feature extractor to enhance sample representation.
- Constructed an adjacency matrix based on sample similarity for patient grouping and RI estimation.
Main Results:
- The DGDEC algorithm demonstrated superior performance in estimating pediatric RIs compared to other indirect methods.
- Predicted RIs were closer to true values across different pediatric age and gender groups.
- Ablation experiments confirmed the effectiveness of patient similarity and multi-scale density features in describing health status.
Conclusions:
- Deep graph clustering, specifically the DGDEC algorithm, provides an effective approach for indirect estimation of pediatric reference intervals.
- The method enhances accuracy and generalization, offering a valuable tool for clinical decision-making.
- The study highlights the importance of patient interrelationships and density features in health status assessment.
Abstract:
Establishing reference intervals (RIs) for pediatric patients is crucial in clinical decision-making, and there is a critical gap of pediatric RIs in China. However, the direct sampling technique for establishing RIs is resource-intensive and ethically challenging. Indirect estimation methods, such as unsupervised clustering algorithms, have emerged as potential alternatives for predicting reference intervals. This study introduces deep graph clustering methods into indirect estimation of pediatric reference intervals. Specifically, we propose a Density Graph Deep Embedded Clustering (DGDEC) algorithm, which incorporates a density feature extractor to enhance sample representation and provides additional perspectives for distinguishing different levels of health status among populations. Additionally, we construct an adjacency matrix by computing the similarity between samples after feature enhancement. The DGDEC algorithm leverages the adjacency matrix to capture the interrelationships between patients and divides patients into different groups, thereby estimating reference intervals for the potential healthy population. The experimental results demonstrate that when compared to other indirect estimation techniques, our method ensures the predicted pediatric reference intervals in different age and gender groups are closer to the true values while maintaining good generalization performance. Additionally, through ablation experiments, our study confirms that the similarity between patients and the multi-scale density features of samples can effectively describe the potential health status of patients.
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