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Updated: Nov 6, 2025

Bioprospecting of Extremophilic Microorganisms to Address Environmental Pollution
Published on: December 30, 2021
Scalable and Consolidated Microbial Platform for Rare Earth Element Leaching and Recovery from Waste Sources
Nathan M Good1, Christina S Kang-Yun2, Morgan Z Su1
1Department of Plant and Microbial Biology, University of California, Berkeley, Berkeley, California 94720, United States.
This study demonstrates a scalable, eco-friendly method using the bacterium Methylobacterium extorquens to recover rare earth elements (REEs) from electronic waste. This biological approach avoids harsh chemicals and high temperatures, offering a sustainable alternative for critical metal recovery.
Area of Science:
- Biotechnology
- Environmental Science
- Materials Science
Background:
- Traditional rare earth element (REE) extraction is energy-intensive, hazardous, and environmentally damaging.
- Existing biobased methods often use extremophiles and share similar detrimental effects.
- Methylobacterium extorquens AM1 can utilize REEs from electronic waste for its metabolic processes.
Purpose of the Study:
- To develop a scalable and sustainable bioleaching method for REE recovery from electronic waste.
- To investigate and engineer mechanisms for enhanced REE bioaccumulation in M. extorquens.
- To demonstrate the potential of M. extorquens as a versatile platform for critical metal recovery.
Main Methods:
- Cultivating Methylobacterium extorquens AM1 using electronic waste as the sole REE source in scalable bioreactors (up to 10 L).
- Investigating the effects of organic acids on REE leaching and engineered overproduction of lanthanophores and pyrroloquinoline quinone for specific bioleaching.
- Employing genetic engineering to modify exopolyphosphatase activity to enhance intracellular REE accumulation.
Main Results:
- Scalable (10 L) REE recovery from electronic waste using M. extorquens without harsh chemicals or high temperatures, achieving consistent yields.
- Engineered REE-specific bioleaching and highly specific, concentration-dependent bioaccumulation.
- Demonstrated increased REE accumulation through genetic modification of phosphate metabolism and successful growth using pulverized smartphones.
Conclusions:
- Methylobacterium extorquens offers a scalable, environmentally friendly platform for recovering critical rare earth elements from diverse electronic waste sources.
- Engineered enhancements in ligand production and phosphate metabolism significantly improve REE bioaccumulation efficiency.
- This biological approach presents a sustainable alternative to conventional chemical extraction methods for critical metals.
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