Quantifying the information in noisy epidemic curves.
Kris V Parag1,2, Christl A Donnelly3,4, Alexander E Zarebski5
1NIHR Health Protection Research Unit in Behavioural Science and Evaluation, University of Bristol, Bristol, UK. kris.parag@bristol.ac.uk.
Nature Computational Science
|January 4, 2024
Summary
Estimating disease spread from surveillance data is challenging due to reporting errors. This study quantifies uncertainty from under-reporting and delays, offering a metric to assess data reliability for infectious disease dynamics.
Area of Science:
- Epidemiology
- Mathematical Biology
- Public Health
Background:
- Accurate estimation of transmissible disease dynamics is crucial for public health policy.
- Surveillance data, commonly used for inference, suffers from inherent reporting errors and delays.
- These limitations critically impact the reliability of epidemiological parameter estimates.
Purpose of the Study:
- To develop an analytical framework for quantifying uncertainty in disease dynamics estimation.
- To create a metric for ranking the informativeness of surveillance data.
- To evaluate the reliability of case and death curves for inferring transmissibility.
Main Methods:
- Developed an analytical framework to quantify uncertainty from under-reporting and reporting delays.
- Introduced a metric to rank surveillance data informativeness.
- Applied the framework and metric to epidemic case and death time series data.
Main Results:
- Quantified the uncertainty introduced by under-reporting and reporting delays in disease surveillance.
- Found that death curves are not universally more reliable than case curves for inferring transmissibility.
- Demonstrated how surveillance limitations reduce actionable information on pathogen spread.
Conclusions:
- The reliability of epidemiological inferences is significantly affected by surveillance data quality.
- A nuanced approach is needed when selecting data sources for estimating disease transmission dynamics.
- The developed framework provides a quantitative basis for understanding and mitigating surveillance-induced uncertainty.
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