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Interactive segmentation of medical images using deep learning.

Xiaoran Zhao1, Haixia Pan1, Wenpei Bai2

  • 1College of Software, Beihang University, Beijing 100191, People's Republic of China.

Physics in Medicine and Biology
|January 10, 2024
PubMed
Summary

This study introduces a novel interactive segmentation method for medical images, significantly reducing labeling time and costs. The approach enhances segmentation accuracy by effectively utilizing user interaction and focusing on image boundaries.

Keywords:
deep learninginteractive segmentationmedical images

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Area of Science:

  • Medical Image Analysis
  • Computer Vision
  • Machine Learning

Background:

  • Deep learning for medical image segmentation requires extensive labeled data, incurring high time and labor costs.
  • Current interactive segmentation methods often use early fusion, leading to sparse interaction information and suboptimal performance.
  • Existing algorithms overlook boundary information, negatively impacting segmentation accuracy.

Purpose of the Study:

  • To develop an efficient interactive segmentation method for medical images that reduces labeling costs.
  • To improve the utilization of user interaction information in segmentation models.
  • To enhance segmentation performance by incorporating boundary information.

Main Methods:

  • Proposed an early and late fusion strategy to effectively integrate user interaction and image features.
  • Introduced a decoupled head structure to extract and leverage image boundary information.
  • Developed a boundary loss function to enforce boundary constraints during segmentation.

Main Results:

  • The proposed method significantly improved segmentation performance compared to the baseline across three medical datasets (Chaos, VerSe, Uterine Myoma MRI).
  • Achieved notable improvements in NoC@80 (number of clicks to reach 80% IoU), with a score of 1.69 on the Chaos dataset.
  • Reduced annotation time by over 50%, requiring only 2-3 clicks per image compared to 25 minutes for manual annotation.

Conclusions:

  • The combined early and late fusion strategy effectively utilizes sparse interaction data.
  • The decoupled head and boundary loss enhance the model's focus on precise object boundaries.
  • This interactive segmentation approach offers a cost-effective and efficient solution for medical image annotation.