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A Robust Discovery Platform for the Identification of Novel Mediators of Melanoma Metastasis
Published on: March 8, 2022
Sox10-Deficient Drug-Resistant Melanoma Cells Are Refractory to Oncolytic RNA Viruses
John Abou-Hamad1,2, Jonathan J Hodgins1,3, Edward Yakubovich1,2
1Centre for Cancer Therapeutics, Ottawa Hospital Research Institute, 501 Smyth Road, Ottawa, ON K1H 8L6, Canada.
Abstract:
Targeted therapy resistance frequently develops in melanoma due to intratumor heterogeneity and epigenetic reprogramming. This also typically induces cross-resistance to immunotherapies. Whether this includes additional modes of therapy has not been fully assessed. We show that co-treatments of MAPKi with VSV-based oncolytics do not function in a synergistic fashion; rather, the MAPKis block infection. Melanoma resistance to vemurafenib further perturbs the cells' ability to be infected by oncolytic viruses. Resistance to vemurafenib can be induced by the loss of SOX10, a common proliferative marker in melanoma. The loss of SOX10 promotes a cross-resistant state by further inhibiting viral infection and replication. Analysis of RNA-seq datasets revealed an upregulation of interferon-stimulated genes (ISGs) in SOX10 knockout populations and targeted therapy-resistant cells. Interestingly, the induction of ISGs appears to be independent of type I IFN production. Overall, our data suggest that the pathway mediating oncolytic resistance is due to the loss of SOX10 during acquired drug resistance in melanoma.
Insights
Melanoma drug resistance hinders oncolytic virus therapy. Loss of SOX10 in resistant melanoma cells impairs viral infection, suggesting a new resistance pathway involving interferon-stimulated genes.
Area of Science:
- Oncology
- Virology
- Molecular Biology
Background:
- Targeted therapy resistance is a major challenge in melanoma treatment, often leading to cross-resistance to other therapies.
- The interplay between drug resistance, epigenetic reprogramming, and susceptibility to oncolytic viruses in melanoma is not fully understood.
Purpose of the Study:
- To investigate the impact of targeted therapy resistance on the efficacy of combined oncolytic virotherapy and targeted therapy in melanoma.
- To elucidate the mechanisms underlying potential cross-resistance to oncolytic viruses in drug-resistant melanoma.
Main Methods:
- Co-treatment experiments with BRAF inhibitors (MAPKi) and Vesicular Stomatitis Virus (VSV)-based oncolytic viruses in melanoma models.
- Analysis of melanoma cell lines with acquired resistance to vemurafenib, including those with SOX10 loss.
- RNA-sequencing (RNA-seq) to analyze gene expression profiles, focusing on interferon-stimulated genes (ISGs).
Main Results:
- Combined MAPK inhibitor (MAPKi) and oncolytic virus treatment showed no synergy; MAPKis inhibited viral infection.
- Melanoma cells resistant to vemurafenib exhibited reduced susceptibility to oncolytic viruses.
- Loss of SOX10, a melanoma marker, induced cross-resistance to oncolytic viruses by inhibiting viral infection and replication.
- SOX10-deficient and drug-resistant melanoma cells displayed upregulated interferon-stimulated genes (ISGs), independent of type I interferon production.
Conclusions:
- Acquired resistance to targeted therapy in melanoma, particularly through SOX10 loss, confers resistance to oncolytic virus therapy.
- Upregulation of ISGs, independent of type I IFN, is implicated in this oncolytic resistance pathway.
- Targeted therapies may impede oncolytic virotherapy efficacy in melanoma by interfering with viral infection.
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