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Mutation status of the KMT2 family associated with immune checkpoint inhibitors (ICIs) therapy and implicating
Dong-Xu Wang1, Jun-Yu Long2, Rui-Zhe Li1
1Department of General Surgery, Qilu Hospital, Shandong University, 107 West Wen Hua Road, Jinan, Shandong, 250012, People's Republic of China.
Abstract:
Mounting evidence suggests a strong association between tumor immunity and epigenetic regulation. The histone-lysine N-methyltransferase 2 (KMT2) family plays a crucial role in the methylation of histone H3 at lysine 4. By influencing chromatin structure and DNA accessibility, this modification serves as a key regulator of tumor progression and immune tolerance across various tumors. These findings highlight the potential significance of the KMT2 family in determining response to immune checkpoint inhibitor (ICI) therapy, which warrants further exploration. In this study, we integrated four ICI-treated cohorts (n = 2069) across 10 cancer types and The Cancer Genome Atlas pan-cancer cohort and conducted a comprehensive clinical and bioinformatic analysis. Our study indicated that patients with KMT2 family gene mutations benefited more from ICI therapy in terms of overall survival (P < 0.001, hazard ratio [HR] = 0.733 [95% confidence interval (CI): 0.632-0.850]), progression-free survival (P = 0.002, HR = 0.669 [95% CI: 0.518-0.864]), durable clinical benefit (P < 0.001, 54.1% vs. 32.6%), and objective response rate (P < 0.001, 40.6% vs. 22.0%). Through a comprehensive analysis of the tumor microenvironment across different KMT2 mutation statuses, we observed that tumors harboring the KMT2 mutation exhibited enhanced immunogenicity, increased infiltration of immune cells, and higher levels of immune cell cytotoxicity, suggesting a propensity towards a "hot tumor" phenotype. Therefore, our study indicates a potential association between KMT2 mutations and a more favorable response to ICI therapy and implicates different tumor microenvironments associated with ICI therapy response.
Insights
Mutations in histone-lysine N-methyltransferase 2 (KMT2) family genes are linked to improved outcomes with immune checkpoint inhibitor (ICI) therapy. KMT2 mutations correlate with enhanced tumor immunity and a "hot tumor" phenotype, suggesting better ICI response.
Area of Science:
- Epigenetics and Tumor Immunity
- Histone Methylation and Cancer Progression
- Immune Checkpoint Inhibitor (ICI) Therapy Response
Background:
- Epigenetic regulation, particularly histone methylation by the KMT2 family, is increasingly recognized for its role in tumor immunity and immune tolerance.
- Histone H3 lysine 4 (H3K4) methylation by KMT2 enzymes influences chromatin structure, impacting tumor progression and immune evasion.
- The KMT2 family's role in modulating the tumor microenvironment suggests potential implications for response to immune checkpoint inhibitor (ICI) therapy.
Discussion:
- This study analyzed integrated clinical and bioinformatic data from 2069 patients across 10 cancer types treated with ICI therapy, alongside The Cancer Genome Atlas pan-cancer cohort.
- The analysis focused on the association between KMT2 family gene mutations and clinical outcomes, including overall survival, progression-free survival, durable clinical benefit, and objective response rate.
- Tumor microenvironment characteristics were evaluated based on KMT2 mutation status to understand the underlying mechanisms of ICI response.
Key Insights:
- Patients with KMT2 family gene mutations demonstrated significantly improved overall survival (P < 0.001), progression-free survival (P = 0.002), durable clinical benefit (P < 0.001), and objective response rate (P < 0.001) with ICI therapy.
- Tumors with KMT2 mutations exhibited enhanced immunogenicity, increased immune cell infiltration, and higher immune cell cytotoxicity, characteristic of a 'hot tumor' phenotype.
- These findings suggest that KMT2 mutations are associated with a more favorable response to ICI therapy, potentially mediated by an inflamed tumor microenvironment.
Outlook:
- KMT2 mutations may serve as a predictive biomarker for ICI therapy efficacy across various cancer types.
- Further research into the specific mechanisms by which KMT2 alterations influence the tumor immune microenvironment is warranted.
- Targeting KMT2 pathways could potentially enhance responses to immune checkpoint inhibitors in non-responding or partially responding patients.
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