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Updated: Jul 5, 2025

Characterization of In Vitro Differentiation of Human Primary Keratinocytes by RNA-Seq Analysis
Published on: May 16, 2020
SOX4 reversibly induces phenotypic changes by suppressing the epithelial marker genes in human keratinocytes
Yoshiyuki Nagaoka1, Yukimasa Takeishi1, Yuki Miyake2
1Department of Physiological Science and Molecular Biology, Fukuoka Dental College, 2-15-1 Tamura, Sawara-ku, Fukuoka, Fukuoka, 814-0193, Japan.
Background:
SOX4 is a transcription factor belonging to the SOX (Sry-related High Mobility Group [HMG] box) family and plays a pivotal role in various biological processes at various stages of life. SOX4 is also expressed in the skin in adults and has been reported to be involved in wound healing, tumor formation, and metastasis.
Methods And Results:
In this study, we investigated the role of SOX4 in keratinocyte phenotypic changes. We generated a SOX4-overexpressing keratinocyte cell line that expresses SOX4 in a doxycycline (DOX)-inducible manner. DOX treatment induced a change from a paving stone-like morphology to a spindle-like morphology under microscopic observation. Comprehensive gene analysis by RNA sequencing revealed increased expression of genes related to anatomical morphogenesis and cell differentiation as well as decreased expression of genes related to epithelial formation and keratinization, suggesting that SOX4 induced EMT-like phenotype in keratinocytes. Differentially expressed genes (DEGs) obtained by RNA-seq were confirmed using qRT-PCR. DOX-treated TY-1 SOX4 showed a decrease in the epithelial markers (KRT15, KRT13, KRT5, and CLDN1) and an increase in the mesenchymal marker FN1. Protein expression changes by Western blotting also showed a decrease in the epithelial marker proteins keratin 15, keratin 13, and claudin 1, and an increase in the mesenchymal marker fibronectin. Removal of DOX from DOX-treated cells also restored the epithelial and mesenchymal markers altered by SOX4.
Conclusion:
Our results indicate that SOX4 reversibly induces an EMT-like phenotype in human keratinocytes via suppression of epithelial marker genes.
Insights
SOX4, a transcription factor, reversibly induces an epithelial-to-mesenchymal transition (EMT)-like phenotype in human keratinocytes. This involves suppressing epithelial markers and promoting mesenchymal characteristics, offering insights into skin cell behavior.
Area of Science:
- Cell Biology
- Molecular Biology
- Dermatology
Background:
- SOX4 is a SOX (Sry-related High Mobility Group [HMG] box) family transcription factor crucial for biological processes.
- SOX4 is present in adult skin and implicated in wound healing, tumor formation, and metastasis.
Purpose of the Study:
- To investigate the role of SOX4 in keratinocyte phenotypic alterations.
- To determine if SOX4 can induce an epithelial-to-mesenchymal transition (EMT)-like state in keratinocytes.
Main Methods:
- Generated a doxycycline (DOX)-inducible SOX4-overexpressing keratinocyte cell line.
- Utilized RNA sequencing for comprehensive gene expression analysis.
- Confirmed gene and protein expression changes using qRT-PCR and Western blotting.
Main Results:
- SOX4 overexpression induced a morphological shift from cobblestone to spindle-like keratinocytes.
- RNA sequencing revealed decreased epithelial markers (e.g., KRT15, CLDN1) and increased mesenchymal markers (e.g., FN1).
- SOX4's effects on epithelial and mesenchymal markers were reversible upon DOX removal.
Conclusions:
- SOX4 reversibly induces an EMT-like phenotype in human keratinocytes.
- This transition is mediated by the suppression of specific epithelial marker genes.
- Findings contribute to understanding SOX4's role in skin biology and disease.
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