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Updated: Jul 5, 2025

Atomic Scale Structural Studies of Macromolecular Assemblies by Solid-state Nuclear Magnetic Resonance Spectroscopy
Published on: September 17, 2017
Carbon-13 chemical shift tensor measurements for nitrogen-dense compounds
Sean T Holmes1,2, Cameron M Boley3, Angelika Dewicki3
1Department of Chemistry & Biochemistry, Florida State University, Tallahassee, Florida, USA.
This study reports 13C chemical shift tensor values for key nitrogen-dense compounds using advanced solid-state NMR. These findings enhance the understanding of molecular structures and aid in computational method development.
Area of Science:
- Solid-state Nuclear Magnetic Resonance (NMR) Spectroscopy
- Computational Chemistry
- Materials Science
Background:
- 13C chemical shift tensors are crucial for understanding molecular structure and electronic environments.
- Experimental data for many nitrogen-dense organic compounds, such as cytosine and imidazole, are scarce in the literature.
- Accurate tensor data is vital for validating computational chemistry methods and developing NMR-based structure determination techniques.
Purpose of the Study:
- To experimentally determine the principal values of 13C chemical shift tensors for five important nitrogen-dense compounds.
- To compare experimental results with theoretical calculations to assess the accuracy of quantum chemical methods.
- To contribute to a growing database of 13C chemical shift tensors for future applications in NMR crystallography and data mining.
Main Methods:
- 1H→13C cross-polarization magic-angle spinning (CP/MAS) NMR experiments were performed at a high magnetic field (18.8 T).
- High-field experiments were used to minimize 14N-13C residual dipolar coupling effects.
- Density functional theory (DFT) calculations, including hybrid (PBE0) and double-hybrid (PBE0-DH) functionals with large basis sets (TZ2P, pc-3) and COSMO solvation models, were employed.
Main Results:
- Principal values of 13C chemical shift tensors were successfully obtained for cytosine, uracil, imidazole, guanidine hydrochloride, and aminoguanidine hydrochloride.
- Calculations using PBE0 or PBE0-DH functionals with TZ2P or pc-3 basis sets, respectively, showed excellent agreement with experimental data.
- Intermolecular effects, modeled using large molecular clusters and electrostatic embedding (COSMO), were essential for accurate theoretical predictions.
Conclusions:
- The study provides valuable experimental 13C chemical shift tensor data for fundamental nitrogen-dense compounds.
- Specific DFT functionals and basis sets were identified as highly reliable for predicting these tensors.
- The generated data will serve as a benchmark for computational methods and support the development of NMR-based applications.
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