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Published on: February 24, 2021
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Controlling the size and adhesion of DNA droplets using surface- enriched DNA molecules
Daqian Gao1, Sam Wilken1,2, Anna B N Nguyen3
1Physics Department, University of California, Santa Barbara, California 93106, USA.
Soft Matter
|January 18, 2024
Summary
Researchers tuned biomolecular liquid droplet properties using DNA surfactants. Adding DNA molecules controlled droplet size and adhesion, with implications for biosensing and biomaterials.
Area of Science:
- Biophysics
- Materials Science
- Biochemistry
Background:
- Biomolecular liquid droplets organize cellular functions.
- These droplets are relevant for biosensing and biomaterials.
- Controlling droplet properties is key for applications.
Purpose of the Study:
- To investigate tuning interfacial properties of DNA nanostar droplets.
- To understand the role of DNA molecules as surfactants.
- To control droplet size and adhesion.
Main Methods:
- Utilized multi-armed DNA nanostar particles to form model biomolecular liquid droplets.
- Employed long DNA molecules with binding affinity as surfactants.
- Used fluorescent measurements to quantify interfacial density.
- Observed droplet size and adhesion to surfaces.
Main Results:
- Long DNA molecules preferentially enriched at droplet interfaces, acting as surfactants.
- Interfacial surfactant density reached approximately 20 per square micron, forming a sparse brush-like structure.
- Increased surfactant concentration reduced droplet size to sub-micron scale.
- DNA surfactants prevented droplet adhesion to both hydrophobic and hydrophilic surfaces.
Conclusions:
- Demonstrated effective control over biomolecular liquid droplet size and adhesive properties.
- The brush-like surfactant layer creates disjoining pressure, impeding coalescence and adhesion.
- Findings have implications for understanding biomolecular condensates and developing new biomaterials and biosensors.
Related Concept Videos
Genomic DNA in Eukaryotes
Eukaryotes have large genomes compared to prokaryotes. To fit their genomes into a cell, eukaryotic DNA is packaged extraordinarily tightly inside the nucleus. To achieve this, DNA is tightly wound around proteins called histones, which are packaged into nucleosomes that are joined by linker DNA and coil into chromatin fibers. Additional fibrous proteins further compact the chromatin, which is recognizable as chromosomes during certain phases of cell division.
DNA Packaging
Overview
Chromatin Packaging
Each human somatic cell contains 6 billion base-pairs of DNA. Each base-pair is 0.34 nm long, which means that each diploid cell contains a staggering 2 meters of DNA. How is such a long DNA strand packed inside a nucleus measuring only 10 - 20 microns in diameter?
The chromatin
In combination with specialized DNA binding protein called Histones, the DNA double helix forms a compact DNA: protein complex called chromatin. The chromatin itself is further compacted into higher-order structures.
The chromatin
In combination with specialized DNA binding protein called Histones, the DNA double helix forms a compact DNA: protein complex called chromatin. The chromatin itself is further compacted into higher-order structures.
Chromatin Packaging
Each human somatic cell contains 6 billion base pairs of DNA. Each base pair is 0.34 nm long, meaning each diploid cell contains a staggering 2 meters of DNA. This long DNA strand is packed inside a nucleus measuring only 10-20 microns in diameter with the help of specialized DNA-binding proteins called histones. Together they form a compact DNA-protein complex called chromatin. The chromatin is further compacted into higher-order structures. The highest level of compaction is achieved during...
The Nucleosome
Human DNA is almost two meters long. However, it is compressed inside a tiny nucleus measuring only a few microns in diameter. To make this degree of compaction possible, DNA is organized into several sequential levels so that it can fit into such a tiny space. The most compact form of DNA is a chromosome that can be seen under a microscope in a dividing cell.
In a chromosome, DNA is wound twice around a protein complex called a histone octamer core, which consists of 8 histone proteins. This...
In a chromosome, DNA is wound twice around a protein complex called a histone octamer core, which consists of 8 histone proteins. This...
The Nucleosome
DNA in a human cell is almost 2m long and it is packed inside a tiny nucleus that is only a few microns in diameter. The level of compaction of DNA inside the nucleus is astonishing. It is organized into several sequentially higher levels of compaction to fit into such a tiny space. The most compact form of DNA is a chromosome that can be seen under a microscope in a dividing cell.
DNA is wound twice around a protein complex called histone core, that consist of 8 histone proteins. This complex...
DNA is wound twice around a protein complex called histone core, that consist of 8 histone proteins. This complex...

