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Updated: Jul 5, 2025

Preparation of Segmented Microtubules to Study Motions Driven by the Disassembling Microtubule Ends
Published on: March 15, 2014
Wave-like oscillations of clamped microtubules driven by collective dynein transport
Shivani A Yadav1, Dhruv Khatri1, Aman Soni1
1Division of Biology, IISER Pune, Pune, India.
Abstract:
Microtubules (MTs) are observed to move and buckle driven by ATP-dependent molecular motors in both mitotic and interphasic eukaryotic cells as well as in specialized structures such as flagella and cilia with a stereotypical geometry. In previous work, clamped MTs driven by a few kinesin motors were seen to buckle and occasionally flap in what was referred to as flagella-like motion. Theoretical models of active-filament dynamics and a following force have predicted that, with sufficient force and binding-unbinding, such clamped filaments should spontaneously undergo periodic buckling oscillations. However, a systematic experimental test of the theory and reconciliation to a model was lacking. Here, we have engineered a minimal system of MTs clamped at their plus ends and transported by a sheet of dynein motors that demonstrate the emergence of spontaneous traveling-wave oscillations along single filaments. The frequencies of tip oscillations are in the millihertz range and are statistically indistinguishable in the onset and recovery phases. We develop a 2D computational model of clamped MTs binding and unbinding stochastically to motors in a "gliding-assay" geometry. The simulated MTs oscillate with a frequency comparable to experiment. The model predicts the effect of MT length and motor density on qualitative transitions between distinct phases of flapping, regular oscillations, and looping. We develop an effective "order parameter" based on the relative deflection along the filament and orthogonal to it. The transitions predicted in simulations are validated by experimental data. These results demonstrate a role for geometry, MT buckling, and collective molecular motor activity in the emergence of oscillatory dynamics.
Insights
Microtubules (MTs) spontaneously oscillate when driven by molecular motors, demonstrating traveling-wave dynamics. This study validates theoretical predictions and reveals how MT geometry and motor activity drive these complex movements.
Area of Science:
- Biophysics
- Cell Biology
- Soft Matter Physics
Background:
- Microtubules (MTs) exhibit complex dynamics, including movement and buckling, driven by molecular motors in various cellular contexts.
- Previous theoretical models predicted spontaneous buckling oscillations in clamped filaments driven by motors, but experimental validation was lacking.
Purpose of the Study:
- To experimentally investigate and model the emergence of spontaneous traveling-wave oscillations in single microtubules.
- To reconcile theoretical predictions with experimental observations of active filament dynamics.
Main Methods:
- Engineered a minimal system using microtubules clamped at their plus ends and transported by dynein motor sheets.
- Developed a 2D computational model simulating microtubule dynamics, motor interactions, and stochastic binding-unbinding.
- Utilized an "order parameter" to quantify filament deflection and analyze transitions between dynamic phases.
Main Results:
- Observed spontaneous traveling-wave oscillations in single microtubules, with frequencies in the millihertz range.
- Simulated microtubule oscillations matched experimental frequencies and predicted transitions between flapping, regular oscillations, and looping based on MT length and motor density.
- Experimental data validated the model's predictions regarding phase transitions.
Conclusions:
- Collective molecular motor activity, microtubule buckling, and system geometry are crucial for generating oscillatory dynamics.
- The study provides experimental evidence and a validated model for active filament oscillations, bridging theory and observation.
- Demonstrates a minimal system capable of complex, emergent oscillatory behavior relevant to biological systems.
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