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Updated: Jul 5, 2025
Biobank for Translational Medicine: Standard Operating Procedures for Optimal Sample Management
Published on: November 30, 2022
Text Extraction and Standardization System Development for Pathological Records in the Korea Biobank Network
SooJeong Ko1,2, Sunghyeon Park1,2, SeolWhan Oh1
1Department of Medical Informatics, College of Medicine, The Catholic University of Korea.
Abstract:
In Korea, the Korea Centers for Disease Control and Prevention operates the Korea BioBank Network (KBN). KBN has pathological records that collected in Korea and it is useful dataset for research. In this study, we established system that time efficient and reduced error by step-by-step data extraction process from KBN pathological records. We tested the extraction process by 769 lung cancer cohorts and 1292 breast cancer cohorts and accuracy is 91%. We expect this system can be used to efficiently process data from multiple institutions, including Korea BioBank Network.
