Evaluating Effects of Resting-State Electroencephalography Data Pre-Processing on a Machine Learning Task for
Robin Vlieger1, Elena Daskalaki1, Deborah Apthorp2
1Australian National University, Canberra, Australian Capital Territory, Australia.
Studies in Health Technology and Informatics
|January 25, 2024
Summary
Preprocessing electroencephalography (EEG) data for Parkinson's disease classification significantly impacts results. Full preprocessing, focusing on alpha and theta bands, yields optimal evaluation metrics, while muscle artifacts inflate performance scores.
Area of Science:
- Neuroscience
- Biomedical Engineering
- Machine Learning
Background:
- Resting-state electroencephalography (EEG) is a key tool for Parkinson's disease (PD) research.
- Machine learning (ML) models are increasingly used for PD classification based on EEG data.
- Variability in EEG preprocessing methods complicates the interpretation and reproducibility of ML-based PD studies.
Purpose of the Study:
- To investigate the impact of different resting-state EEG preprocessing stages on ML-based Parkinson's disease classification.
- To evaluate the influence of specific frequency bands (alpha and theta) and regions of interest on classification performance.
- To identify optimal preprocessing strategies for enhancing the accuracy of EEG-driven PD detection.
Main Methods:
- Utilized three distinct EEG datasets, applying four different preprocessing levels to each.
- Extracted power features from six predefined regions of interest.
- Employed Random Forest Classifiers for feature selection and Support Vector Machines for final classification.
Main Results:
- Muscle artifacts were found to artificially inflate evaluation metrics, highlighting the importance of effective artifact removal.
- Features from the alpha and theta frequency bands demonstrated superior performance when data underwent complete preprocessing.
- The extent of preprocessing significantly altered the classification outcomes across all datasets.
Conclusions:
- Thorough preprocessing of resting-state EEG data is crucial for reliable machine learning-based Parkinson's disease classification.
- Focusing on alpha and theta band features after comprehensive preprocessing offers the most promising results.
- Standardizing EEG preprocessing pipelines is essential for improving the consistency and validity of future PD research.


