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Published on: December 10, 2016
Antimicrobial Resistance of Clostridioides difficile in Children from a Tertiary Pediatric Hospital in Shanghai,
Xiaolu Li1, Yizhong Wang1,2, Rong Cao1
1Department of Gastroenterology, Hepatology and Nutrition, Shanghai Children's Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, People's Republic of China.
Insights
Emerging resistance to metronidazole and vancomycin in pediatric Clostridioides difficile infection (CDI) is a growing concern in China. Further research is needed to understand the novel resistance mechanisms in C. difficile isolates.
Area of Science:
- Microbiology
- Infectious Diseases
- Pediatrics
Background:
- Previous studies indicated a high recurrence rate of Clostridioides difficile infection (CDI) in children post-antibiotic therapy.
- Investigating the prevalence of metronidazole and vancomycin resistant C. difficile isolates in pediatric CDI cases is crucial.
Purpose of the Study:
- To determine the presence and characteristics of metronidazole and vancomycin resistant C. difficile isolates in pediatric CDI patients.
- To identify antibiotic resistance genes (ARGs) and specific resistance mechanisms in these isolates.
Main Methods:
- Antimicrobial susceptibility testing (AST) using agar dilution method for 50 C. difficile isolates from pediatric CDI patients (2019-2022).
- Whole-genome sequencing (WGS) to identify ARGs using Resfinder and CARD databases.
- Detection of pCD-METRO plasmid and vanA/B genes using SRST2.
Main Results:
- High rates of resistance observed: 30% for metronidazole, 6% for vancomycin, and 88% multidrug-resistant (MDR) isolates.
- Identified ARGs associated with resistance to aminoglycosides, lincosamides, fluoroquinolones, glycopeptides, tetracyclines, and trimethoprim.
- Absence of pCD-METRO plasmid and vanA/B genes in all tested isolates.
Conclusions:
- C. difficile isolates with reduced susceptibility to metronidazole and vancomycin are emerging in pediatric CDI in China.
- The lack of common resistance markers (pCD-METRO, vanA/B) suggests novel resistance mechanisms are involved.
- This finding highlights the need for continued surveillance and research into pediatric CDI resistance patterns.
Background:
Our previous study reported a high rate of recurrence in children with Clostridioides difficile (C. difficile) infection (CDI) after conventional antibiotic therapy. Here, we aimed to explore whether metronidazole and vancomycin resistant C. difficile isolates are circulating in pediatric CDI.
Methods:
Antimicrobial susceptibility testing (AST) using the agar dilution method according to the Clinical and Laboratory Standard Institute (CLSI) were performed on C. difficile isolates collected from children with CDI between 2019 and 2022 at the Shanghai Children's Hospital. Whole-genome sequencing (WGS) was performed on all C. difficile isolates, and the presence of antibiotic resistance genes (ARGs) were identified using Resfinder and the Comprehensive Antibiotic Resistance Database (CARD). The presence of plasmid pCD-METRO was detected using SRST2 (v0.2.0) against 8 pCD-METRO coding sequences.
Results:
A total of 50 C. difficile isolates were collected from stools of CDI children. The overall resistance rate on all isolates was 30.00% for metronidazole, 6.00% for vancomycin, 0% for rifaximin, 2.00% for rifampin, 24.00% for meropenem, 100.00% for ceftriaxone and clindamycin, 86.00% for erythromycin, 30.0% for levofloxacin, and 50.0% for tetracycline. Multidrug-resistant (MDR) was presented in 44 isolates (88.00%). Sixteen reported potential ARGs relating with resistance to antibiotic classes of aminoglycoside (AAC(6')-Ie-APH(2")-Ia, aad(6), ANT(6)-Ib, APH(2")-If, APH(3')-IIIa), lincosamide-clindamycin-erythromycin (ErmB, ErmQ), fluoroquinolones (CdeA), glycopeptides (vanRG), nucleoside (SAT-4), tetracycline (tetM, tetA(P), tetB(P), tetO), and trimethoprim (dfrF) were identified. However, the pCD-METRO plasmid and vanA/B were not detected in any isolates.
Conclusion:
C. difficile isolates from children with reduced susceptibility to metronidazole and vancomycin are emerging in pediatric CDI in China. The lack of pCD-METRO plasmid and vanA/B associated with reduced antibiotic susceptibility suggests there are additional mechanisms of resistance.
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