Related Experiment Video
Updated: Jul 22, 2026

Retinal Vascular Reactivity as Assessed by Optical Coherence Tomography Angiography
Published on: March 26, 2020
CF-Loss: Clinically-relevant feature optimised loss function for retinal multi-class vessel segmentation and vascular
Yukun Zhou1, MouCheng Xu2, Yipeng Hu3
1Centre for Medical Image Computing, University College London, London WC1V 6LJ, UK; NIHR Biomedical Research Centre, Moorfields Eye Hospital NHS Foundation Trust, London EC1V 9EL, UK; Institute of Ophthalmology, University College London, London EC1V 9EL, UK.
Insights
This study introduces a novel loss function (CF-Loss) to improve blood vessel segmentation and feature extraction for disease diagnosis. Optimized vascular features enhance predictions for conditions like ischemic stroke.
Area of Science:
- Medical Imaging
- Biomedical Engineering
- Ophthalmology
Background:
- Accurate characterization of vascular features is crucial for diagnosing ophthalmic and systemic diseases.
- Existing methods for vessel segmentation may not directly optimize clinically relevant vascular metrics.
Purpose of the Study:
- To develop and validate a novel loss function (CF-Loss) that explicitly incorporates clinically relevant vascular features into the segmentation process.
- To improve the accuracy of multi-class vessel segmentation and the estimation of vascular features.
Main Methods:
- An end-to-end loss function, CF-Loss, was designed to categorize pixels into artery, vein, uncertain, and background classes.
- CF-Loss was integrated with standard segmentation networks and evaluated on three public datasets.
- The performance of CF-Loss was compared against standard segmentation metrics and its impact on a clinical downstream task (ischemic stroke prediction) was assessed.
Main Results:
- CF-Loss significantly enhanced both multi-class vessel segmentation accuracy and vascular feature estimation.
- Pixel-based segmentation performance did not always correlate with the accuracy of vascular features, underscoring the benefit of direct feature optimization.
- Improved vascular features derived from CF-Loss demonstrated quantitative benefits in predicting ischemic stroke.
Conclusions:
- CF-Loss offers a superior approach for optimizing vascular feature extraction through direct integration into the segmentation loss function.
- This method holds promise for advancing biomarker discovery and improving diagnostic accuracy in various diseases.
- The developed technique provides a valuable tool for clinical applications, particularly in predicting neurological conditions like ischemic stroke.
Abstract:
Characterising clinically-relevant vascular features, such as vessel density and fractal dimension, can benefit biomarker discovery and disease diagnosis for both ophthalmic and systemic diseases. In this work, we explicitly encode vascular features into an end-to-end loss function for multi-class vessel segmentation, categorising pixels into artery, vein, uncertain pixels, and background. This clinically-relevant feature optimised loss function (CF-Loss) regulates networks to segment accurate multi-class vessel maps that produce precise vascular features. Our experiments first verify that CF-Loss significantly improves both multi-class vessel segmentation and vascular feature estimation, with two standard segmentation networks, on three publicly available datasets. We reveal that pixel-based segmentation performance is not always positively correlated with accuracy of vascular features, thus highlighting the importance of optimising vascular features directly via CF-Loss. Finally, we show that improved vascular features from CF-Loss, as biomarkers, can yield quantitative improvements in the prediction of ischaemic stroke, a real-world clinical downstream task. The code is available at https://github.com/rmaphoh/feature-loss.
Related Concept Videos
Reducing Line Loss
With a step-up transformer at the source, the voltage is increased, thereby reducing the current in the transmission lines since power loss in...
Imaging Studies VII: Vascular Imaging

