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Microarray-based Identification of Individual HERV Loci Expression: Application to Biomarker Discovery in Prostate Cancer
Published on: November 2, 2013
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Circulating tumor DNA and tissue complementarily detect genomic alterations in metastatic hormone-sensitive prostate
Bin Yang1,2, Tingting Zhao3,4, Baijun Dong5
1Department of Urology, Shanghai Tenth People's Hospital, Tongji University School of Medicine, Shanghai, China.
Iscience
|February 8, 2024
Summary
Circulating tumor DNA (ctDNA) shows promise in advanced prostate cancer, complementing tissue analysis for genomic alterations. This study highlights ctDNA
Area of Science:
- Oncology
- Genomics
- Molecular Diagnostics
Background:
- The clinical utility of circulating tumor DNA (ctDNA) in hormone-sensitive prostate cancer (HSPC) is not fully understood.
- Tissue-based genomic profiling is standard, but liquid biopsies offer a less invasive alternative.
- Understanding ctDNA concordance with tissue is crucial for its integration into clinical practice.
Purpose of the Study:
- To evaluate the concordance between ctDNA and tissue genomic profiling in a large real-world cohort of HSPC patients.
- To assess the impact of disease burden on ctDNA abundance and detection rates.
- To identify genomic alterations associated with progression to castration-resistant prostate cancer (CRPC).
Main Methods:
- Retrospective analysis of a large, multicenter, real-world cohort of HSPC patients.
- Concordance analysis between ctDNA and tissue-based genomic profiling.
- Correlation of genomic alterations with disease progression and risk of CRPC.
Main Results:
- Diminished ctDNA abundance was observed in patients with low tumor burden.
- Concordance between ctDNA and tissue increased with disease burden.
- Exclusive genomic alterations were found in both ctDNA and tissue, particularly in high-volume metastatic disease.
- Specific gene alterations (BRCA1, BRCA2, CDK12, TP53, PTEN, RB1) and cumulative alterations were linked to shorter time to CRPC and escalated CRPC risk.
Conclusions:
- ctDNA analysis is a valuable tool in HSPC, complementing tissue profiling for detecting clinically relevant genomic alterations.
- The integration of both ctDNA and tissue analysis can improve the detection of actionable mutations.
- This approach holds potential for enhanced management strategies in advanced prostate cancer.

