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Updated: Jul 4, 2025

Using In Vitro Fluorescence Resonance Energy Transfer to Study the Dynamics Of Protein Complexes at a Millisecond Time Scale
Published on: March 14, 2019
Dynamic molecular architecture and substrate recruitment of cullin3-RING E3 ligase CRL3KBTBD2
Yuxia Hu1, Zhao Zhang2,3, Qiyu Mao1
1Shanghai Fifth People's Hospital, Shanghai Institute of Infectious Disease and Biosecurity, Shanghai Key Laboratory of Medical Epigenetics and Institutes of Biomedical Sciences, Fudan University, Shanghai, China.
Abstract:
Phosphatidylinositol 3-kinase α, a heterodimer of catalytic p110α and one of five regulatory subunits, mediates insulin- and insulin like growth factor-signaling and, frequently, oncogenesis. Cellular levels of the regulatory p85α subunit are tightly controlled by regulated proteasomal degradation. In adipose tissue and growth plates, failure of K48-linked p85α ubiquitination causes diabetes, lipodystrophy and dwarfism in mice, as in humans with SHORT syndrome. Here we elucidated the structures of the key ubiquitin ligase complexes regulating p85α availability. Specificity is provided by the substrate receptor KBTBD2, which recruits p85α to the cullin3-RING E3 ubiquitin ligase (CRL3). CRL3KBTBD2 forms multimers, which disassemble into dimers upon substrate binding (CRL3KBTBD2-p85α) and/or neddylation by the activator NEDD8 (CRL3KBTBD2~N8), leading to p85α ubiquitination and degradation. Deactivation involves dissociation of NEDD8 mediated by the COP9 signalosome and displacement of KBTBD2 by the inhibitor CAND1. The hereby identified structural basis of p85α regulation opens the way to better understanding disturbances of glucose regulation, growth and cancer.
Insights
The study reveals how the KBTBD2-CRL3 ubiquitin ligase complex degrades the p85α subunit, crucial for insulin signaling and preventing diseases like diabetes and cancer.
Area of Science:
- Biochemistry
- Molecular Biology
- Cellular Signaling
Background:
- Phosphatidylinositol 3-kinase α (PI3Kα) is vital for insulin and IGF signaling, and its dysregulation contributes to oncogenesis.
- Cellular p85α subunit levels are controlled by proteasomal degradation; impaired ubiquitination leads to diseases like diabetes and dwarfism.
Purpose of the Study:
- To elucidate the structural mechanisms of ubiquitin ligase complexes that regulate p85α availability.
- To understand the molecular basis of PI3Kα pathway dysregulation in metabolic and growth disorders.
Main Methods:
- Structural elucidation of key ubiquitin ligase complexes.
- Biochemical assays to determine substrate recruitment and complex assembly/disassembly dynamics.
- Analysis of neddylation and deactivation mechanisms.
Main Results:
- Identified KBTBD2 as the substrate receptor recruiting p85α to the CRL3 E3 ubiquitin ligase.
- Demonstrated that CRL3KBTBD2 undergoes conformational changes upon substrate binding and neddylation, facilitating p85α ubiquitination.
- Revealed the roles of NEDD8, COP9 signalosome, and CAND1 in regulating CRL3KBTBD2 activity and p85α degradation.
Conclusions:
- The structural insights into p85α regulation by CRL3KBTBD2 provide a molecular basis for understanding diseases linked to PI3Kα pathway dysfunction.
- This knowledge may pave the way for therapeutic strategies targeting glucose regulation, growth, and cancer.
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