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Published on: October 16, 2018
Australian terrestrial environments harbour extensive RNA virus diversity
Sabrina Sadiq1, Erin Harvey1, Jonathon C O Mifsud1
1Sydney Institute for Infectious Diseases, School of Medical Sciences, The University of Sydney, Sydney, NSW 2006, Australia.
Australian soils and sediments host a vast diversity of novel RNA viruses, many belonging to the Lenarviricota phylum. This discovery highlights the unique viral ecosystems present in Australia.
Area of Science:
- Virology
- Ecology
- Genomics
Background:
- Australia possesses unique native fauna and flora.
- The presence of unique viruses in Australian ecosystems remains largely unexplored.
Purpose of the Study:
- To investigate the viral diversity in Australian ecosystems.
- To characterize novel RNA viruses in Australian farmland and sediment samples.
Main Methods:
- Meta-transcriptomic sequencing was employed on 16 samples from Australian coasts.
- Bioinformatic analyses were used to identify and classify viral sequences.
Main Results:
- 2460 putatively novel RNA viruses were identified across 18 orders.
- The majority of novel viruses belonged to the Lenarviricota phylum.
- Novel viral clades, genera, and families were discovered, alongside highly divergent lineages.
Conclusions:
- Australian soils and sediments exhibit significant viral diversity.
- This viral diversity reflects the unique biodiversity of local fauna and flora.
- Environmental factors like sampling site, soil type, and land use influence viral abundance and diversity.
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