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Published on: December 3, 2019
Novel tumor-associated macrophage populations and subpopulations by single cell RNA sequencing
Juanjuan Wang1,2,3, Ningning Zhu1,2,3, Xiaomin Su1,2,3
1Translational Medicine Institute, Affiliated Tianjin Union Medical Center of Nankai University, Nankai University, Tianjin, China.
Abstract:
Tumor-associated macrophages (TAMs) are present in almost all solid tumor tissues. 16They play critical roles in immune regulation, tumor angiogenesis, tumor stem cell activation, tumor invasion and metastasis, and resistance to therapy. However, it is unclear how TAMs perform these functions. With the application of single-cell RNA sequencing (scRNA-seq), it has become possible to identify TAM subpopulations associated with distinct functions. In this review, we discuss four novel TAM subpopulations in distinct solid tumors based on core gene signatures by scRNA-seq, including FCN1 +, SPP1 +, C1Q + and CCL18 + TAMs. Functional enrichment and gene expression in scRNA-seq data from different solid tumor tissues found that FCN1 + TAMs may induce inflammation; SPP1 + TAMs are potentially involved in metastasis, angiogenesis, and cancer cell stem cell activation, whereas C1Q + TAMs participate in immune regulation and suppression; And CCL18 + cells are terminal immunosuppressive macrophages that not only have a stronger immunosuppressive function but also enhance tumor metastasis. SPP1 + and C1Q + TAM subpopulations can be further divided into distinct populations with different functions. Meanwhile, we will also present emerging evidence highlighting the separating macrophage subpopulations associated with distinct functions. However, there exist the potential disconnects between cell types and subpopulations identified by scRNA-seq and their actual function.
Insights
Tumor-associated macrophages (TAMs) exhibit distinct subtypes, including FCN1+, SPP1+, C1Q+, and CCL18+ TAMs. These subpopulations play crucial roles in tumor progression, immune suppression, and metastasis.
Area of Science:
- Oncology
- Immunology
- Genomics
Background:
- Tumor-associated macrophages (TAMs) are prevalent in solid tumors.
- TAMs influence immune regulation, angiogenesis, metastasis, and therapy resistance.
- The precise functions of TAM subpopulations remain largely undefined.
Purpose of the Study:
- To review novel TAM subpopulations identified by single-cell RNA sequencing (scRNA-seq).
- To elucidate the distinct functions of FCN1+, SPP1+, C1Q+, and CCL18+ TAMs in solid tumors.
Main Methods:
- Analysis of scRNA-seq data from various solid tumor tissues.
- Identification of TAM subpopulations based on core gene signatures.
- Functional enrichment and gene expression analysis.
Main Results:
- FCN1+ TAMs are associated with inflammation.
- SPP1+ TAMs may drive metastasis, angiogenesis, and cancer stem cell activation.
- C1Q+ TAMs are implicated in immune regulation and suppression.
- CCL18+ TAMs exhibit potent immunosuppression and enhance metastasis.
- SPP1+ and C1Q+ TAMs can be further subdivided into functionally distinct populations.
Conclusions:
- scRNA-seq reveals distinct TAM subpopulations with specialized functions in solid tumors.
- Understanding these subpopulations is crucial for targeted cancer therapies.
- Further research is needed to bridge the gap between identified subpopulations and their precise functional roles.

