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Updated: Jul 3, 2025

Guided Protocol for Fecal Microbial Characterization by 16S rRNA-Amplicon Sequencing
Published on: March 19, 2018
Alterations of gut microbiota in infants with biliary atresia identified by 16S rRNA-sequencing
Fei Liu1, Ru Wei2, Xiaogang Xu1
1Department of Pediatric Surgery, Guangdong Provincial Clinical Research Center for Child Health, Guangzhou Women and Children's Medical Center, Guangzhou Medical University, 9 Jinsui Road, Guangzhou, Guangdong, 510623, China.
Insights
Gut microbiota differs in infants with biliary atresia (BA). The Klebsiella/Bifidobacterium ratio may serve as a biomarker for identifying BA, aiding in treatment strategies.
Area of Science:
- Neonatal diseases
- Gastroenterology
- Microbiome research
Background:
- Biliary atresia (BA) is a severe neonatal condition causing bile duct inflammation and liver fibrosis.
- Understanding the gut microbiome in BA infants is crucial for identifying biomarkers.
- This study investigates the gut microbiota's role in biliary atresia.
Purpose of the Study:
- To explore the relationship between gut microbiota composition and biliary atresia.
- To identify potential non-invasive biomarkers for BA diagnosis.
Main Methods:
- 16S ribosomal RNA (rRNA) gene sequencing was used to analyze gut microbiota.
- Compared microbiota in 31 infants with BA and 20 healthy controls.
Main Results:
- Significant differences in gut microbiota composition were observed between BA and control groups (P < 0.05).
- The Klebsiella/Bifidobacterium abundance ratio showed high potential for BA identification (P < 0.01).
- Differentially abundant bacteria were involved in lipid and vitamin metabolism.
Conclusions:
- Gut microbiota alterations are linked to biliary atresia.
- The Klebsiella/Bifidobacterium ratio may serve as a non-invasive biomarker for BA.
- Findings can inform treatments targeting microbiota dysbiosis in BA.
Background:
Biliary atresia (BA) is a severe neonatal disease with progressive intra- and extra-hepatic bile ducts inflammation and hepatic fibrosis. Characterization of gut microbiome profiles in infants with biliary atresia can provide valuable information and potential disease biomarkers. Our study aims to explore the relationship between gut microbiota and biliary atresia.
Methods:
16 S ribosomal RNA (rRNA) gene sequencing was carried out to identify the differences in composition and diversity of gut microbiota between infants with BA and healthy subjects. A total of 31 infants with biliary atresia and 20 healthy subjects were recruited.
Results:
The composition of gut microbiota in BA group was significantly different with the normal control group (P < 0.05) and the abundance ratio of Klebsiella/Bifidobacterium showed great potential for identification of BA (P < 0.01). In addition, the differential bacterial taxa were involved in lipid and vitamins metabolism.
Conclusion:
Our results could provide potential non-invasive biomarker for identification of biliary atresia and contribute to the treatment in terms of ameliorating microbiota dysbiosis.
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