PARG-deficient tumor cells have an increased dependence on EXO1/FEN1-mediated DNA repair

Christina Andronikou1,2,3,4, Kamila Burdova5, Diego Dibitetto1,4

  • 1Institute of Animal Pathology, Vetsuisse Faculty, University of Bern, 3012, Bern, Switzerland.

The EMBO Journal
|February 15, 2024
PubMed

Insights

Targeting poly(ADP-ribose) glycohydrolase (PARG) uncovers new vulnerabilities in cancer cells. Inhibiting EXO1/FEN1 shows promise for treating PARPi-resistant and BRCA2-deficient tumors.

Area of Science:

  • Genetics
  • Cancer Biology
  • DNA Repair

Background:

  • Poly(ADP-ribose) glycohydrolase (PARG) inhibition is a potential cancer therapy.
  • Understanding genetic vulnerabilities is crucial for PARG-targeted treatments.
  • PARG loss can cause resistance to PARP inhibitors (PARPi) in BRCA2;p53-deficient tumors.

Purpose of the Study:

  • Identify genetic vulnerabilities in PARG-deficient cancer cells.
  • Explore synthetic lethal interactions with PARG loss.
  • Investigate therapeutic strategies for PARPi-resistant and homologous recombination-deficient tumors.

Main Methods:

  • Whole-genome CRISPR/Cas9 drop-out screens were performed.
  • Assessed the essentiality of DNA repair genes in PARG;BRCA2;p53-deficient cells.
  • Analyzed replication fork progression, DNA single-strand break repair, and Okazaki fragment processing.

Main Results:

  • EXO1 and FEN1 were identified as major synthetic lethal interactors of PARG loss.
  • PARG;BRCA2;p53-deficient cells exhibit compromised DNA repair pathways.
  • Inhibition of EXO1/FEN1 is lethal in the context of PARG loss and BRCA2 deficiency.

Conclusions:

  • EXO1/FEN1 targeting is a viable strategy for PARPi-resistant tumors with PARG loss.
  • Targeting EXO1/FEN1 can enhance PARG inhibitor efficacy in homologous recombination-deficient cancers.
  • This study reveals critical DNA repair vulnerabilities associated with PARG deficiency.

Related Concept Videos

Long-patch Base Excision Repair01:02

Long-patch Base Excision Repair

Since the discovery of the two BER pathways, there has been a debate about how a cell chooses one pathway over the other and the factors determining this selection. Numerous in vitro experiments have pointed out multiple determinants for the sub-pathway selection. These are:
7.0K
Base Excision Repair01:54

Base Excision Repair

One of the common DNA damages is the chemical alteration of single bases by alkylation, oxidation, or deamination. The altered bases cause mispairing and strand breakage during replication. This type of damage causes minimal change to the DNA double helix structure and can be repaired by the base excision repair (BER) pathways. BER corrects damaged DNA sequences by removing the damaged base and restoring the original base sequence using the complementary strand as a template.
The first step of...
22.3K
Nucleotide Excision Repair01:38

Nucleotide Excision Repair

DNA Distortion and Damage
Cells are regularly exposed to mutagens—factors in the environment that can damage DNA and generate mutations. UV radiation is one of the most common mutagens and is estimated to introduce a significant number of changes in DNA. These include bends or kinks in the structure, which can block DNA replication or transcription. If these errors are not fixed, the damage can cause mutations, which in turn can result in cancer or disease depending on which sequences are...
3.5K
DNA Damage can Stall the Cell Cycle02:37

DNA Damage can Stall the Cell Cycle

In response to DNA damage, cells can pause the cell cycle to assess and repair the breaks. However, the cell must check the DNA at certain critical stages during the cell cycle. If the cell cycle pauses before DNA replication, the cells will contain twice the amount of DNA. On the other hand, if cells arrest after DNA replication but before mitosis, they will contain four times the normal amount of DNA. With a host of specialized proteins at their disposal,cells must use the right protein at...
9.2K
Abnormal Proliferation02:23

Abnormal Proliferation

Under normal conditions, most adult cells remain in a non-proliferative state unless stimulated by internal or external factors to replace lost cells. Abnormal cell proliferation is a condition in which the cell's growth exceeds and is uncoordinated with normal cells. In such situations, cell division persists in the same excessive manner even after cessation of the stimuli, leading to persistent tumors. The tumor arises from the damaged cells that replicate to pass the damage to the...
4.5K
Restarting Stalled Replication Forks02:37

Restarting Stalled Replication Forks

DNA replication is initiated at sites containing predefined DNA sequences known as origins of replication. DNA is unwound at these sites by the minichromosome maintenance (MCM) helicase and other factors such as Cdc45 and the associated GINS complex.The unwound single strands are protected by replication protein A (RPA) until DNA polymerase starts synthesizing DNA at the 5’ end of the strand in the same direction as the replication fork. To prevent the replication fork from falling apart,...
5.8K