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Updated: May 12, 2026

Metabolic Pathway Confirmation and Discovery Through 13C-labeling of Proteinogenic Amino Acids
Published on: January 26, 2012
Probing efficient microbial CO2 utilisation through metabolic and process modelling.
Philip J Gorter de Vries1, Viviënne Mol1, Nikolaus Sonnenschein2
1The Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Kongens Lyngby, Denmark.
Acetogenic gas fermentation can be optimized for waste gas upcycling. Modeling shows higher temperatures and specific H2:CO2 ratios improve yields, but expanding product range beyond acetate remains challenging.
Area of Science:
- Biotechnology
- Chemical Engineering
- Environmental Science
Background:
- Acetogenic gas fermentation offers a promising route for upcycling carbon-rich waste gases.
- Current limitations in product range, yield, rate, and titre hinder economic viability.
Purpose of the Study:
- To optimize acetogenic gas fermentation processes through integrated process and metabolic modeling.
- To explore conditions and strategies for expanding the product portfolio beyond acetate.
Main Methods:
- Paired process modeling and host-agnostic metabolic modeling were employed.
- Simulations were conducted for an industrial-scale bubble column reactor.
- Product volatility analysis and metabolic pathway modeling were utilized.
Main Results:
- Increased temperatures enhance gas transfer rates, especially for H2.
- An optimal feed composition of 9:1 mol H2 to mol CO2 was predicted.
- Thermophilic metabolism favors catabolic products; expanding product range is metabolically unfavorable compared to acetate/ethanol.
Conclusions:
- Process optimization can improve acetogenic gas fermentation efficiency.
- In-situ recovery of volatile products like acetone is feasible but challenging.
- Alternative strategies are needed to overcome metabolic limitations for producing diverse carbon-negative chemicals via acetogenic CO2 fixation.
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