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Observing Dynamic Conformational Changes within the Coiled-Coil Domain of Different Laminin Isoforms Using High-Speed
Lucky Akter1, Holger Flechsig1, Arin Marchesi1,2
1WPI Nano Life Science Institute, Kanazawa University, Kanazawa 920-1167, Japan.
International Journal of Molecular Sciences
|February 24, 2024
Summary
High-speed atomic force microscopy visualized dynamic structural changes in laminin-111 and laminin-332. This revealed distinct coiled-coil domain flexibility and C-terminal globular domain rearrangements in these crucial cell adhesion proteins.
Area of Science:
- Biochemistry
- Structural Biology
- Cell Biology
Background:
- Laminins are essential extracellular matrix glycoproteins involved in cell adhesion and tissue organization.
- Their cross-shaped structure comprises α, ß, and γ-chains, with laminin G-like (LG) domains at the C-terminus mediating cell binding.
- Previous studies suggested dynamic conformational changes regulate laminin function, but lacked single-molecule dynamic analysis.
Purpose of the Study:
- To investigate the dynamic conformational changes of laminin-111 and laminin-332 at the single-molecule level.
- To characterize the ultrastructure and conformational flexibility of laminin coiled-coil and LG domains under physiological conditions.
- To provide novel insights into laminin molecular dynamics using high-speed atomic force microscopy.
Main Methods:
- High-speed atomic force microscopy (HS-AFM) was employed for real-time, sub-second imaging of laminin-111 and laminin-332.
- Surface immobilization and imaging conditions were optimized for high-resolution visualization.
- Complementary computational methods including AlphaFold structure prediction and molecular dynamics simulations were utilized.
Main Results:
- Laminin-111 exhibited a stable, S-shaped coiled-coil domain with minimal conformational changes.
- Laminin-332 displayed rapid switching of its coiled-coil domain between straight and bent conformations around a central hinge.
- Dynamic rearrangements of C-terminal LG domains between compact and open states were observed for both laminin isoforms.
Conclusions:
- HS-AFM directly visualizes dynamic molecular rearrangements in laminin isoforms, offering unprecedented structural insights.
- Laminin-332 possesses a flexible coiled-coil domain, suggesting a distinct mechanism for regulating its function compared to laminin-111.
- The study highlights the importance of dynamic conformational changes in laminin function and provides a powerful technique for their analysis.
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