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A Machine Learning-Based Risk Score for Prediction of Infective Endocarditis Among Patients With Staphylococcus

Christopher Koon-Chi Lai1,2, Eman Leung3, Yinan He3

  • 1Department of Microbiology, Faculty of Medicine, The Chinese University of Hong Kong, Hong Kong SAR, China.

The Journal of Infectious Diseases
|February 29, 2024
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Summary

A new risk score helps identify Staphylococcus aureus infective endocarditis (SA-IE) risk in patients with S. aureus bacteremia (SAB) early. This tool aids clinical decisions before subjective judgment, improving patient stratification.

Keywords:
Staphylococcus aureusbloodstream infectionsinfective endocarditismachine learningprediction model

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Area of Science:

  • Infectious Diseases
  • Cardiology
  • Data Science

Background:

  • Stratifying Staphylococcus aureus infective endocarditis (SA-IE) risk in patients with S. aureus bacteremia (SAB) is crucial for timely clinical management.
  • Existing risk assessment methods often rely on subjective clinical judgment, necessitating objective tools for early risk stratification.

Purpose of the Study:

  • To develop and validate a novel, objective risk score for predicting SA-IE in SAB patients.
  • The risk score aims for early application at the time of blood culture positivity, independent of clinical judgment.

Main Methods:

  • A retrospective big data analysis of hospitalized SAB patients (2009-2019) was performed.
  • A random forest model identified key predictive variables for SA-IE.
  • Data were split into derivation and validation cohorts, with AUCROCs calculated.

Main Results:

  • The study included 15,741 SAB patients, with 4.18% diagnosed with SA-IE.
  • The developed risk score achieved an AUCROC of 0.74, demonstrating good predictive performance.
  • Key predictors identified were age, prior infective endocarditis, valvular heart disease, and community onset.

Conclusions:

  • A novel, objective risk score for SA-IE in SAB patients was successfully developed.
  • The risk score's performance is comparable to existing methods and can be applied early in patient management.
  • This tool facilitates early risk stratification, aiding clinical decision-making upon SAB diagnosis.